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The map label for this gene is nifH

Identifier: 154244101

GI number: 154244101

Start: 137497

End: 138378

Strand: Reverse

Name: nifH

Synonym: Xaut_0143

Alternate gene names: 154244101

Gene position: 138378-137497 (Counterclockwise)

Preceding gene: 154244118

Following gene: 154244100

Centisome position: 2.61

GC content: 63.38

Gene sequence:

>882_bases
ATGTCTTCGCTGCGACAGATCGCGTTTTACGGGAAGGGTGGCATCGGCAAGTCCACCACGTCTCAGAATACCCTGGCTGC
GCTTGCGCAGATGGGTCACAAGATCCTCATCGTGGGTTGCGACCCCAAGGCCGACTCGACCCGCCTGATCCTGCACGCCA
AGGCCCAGGACACCATCCTGTCGCTTGCGGCGAACGCCGGCTCGGTGGAAGACCTCGAGCTCGAGGACGTGATGAAGATC
GGCTACCAGGACATCCGCTGCGTGGAGTCCGGTGGTCCTGAGCCGGGCGTCGGCTGCGCCGGCCGCGGCGTGATCACCTC
GATCAACTTCCTGGAAGAGAACGGCGCCTACGAGGACATCGACTACGTGTCCTACGACGTGCTCGGCGACGTGGTGTGCG
GCGGCTTCGCCATGCCCATCCGCGAGAACAAGGCCCAGGAAATCTACATCGTCATGTCCGGCGAGATGATGGCCATGTAT
GCGGCCAACAACATCTCCAAGGGCATTCTGAAGTATGCCAACTCCGGCGGCGTGCGCCTGGGCGGGCTGGTGTGCAACGA
GCGCCAGACCGACAAGGAGCTGGAGCTGGCCGAGAACCTGGCCAAGAAGCTCGGCACCGAGCTGATCTACTTCGTGCCGC
GCGACAACATCGTGCAGCACGCCGAGCTGCGCCGCATGACCGTGATCGAGTATGCGCCCGATTCGGAGCAGGCCCAGCAC
TACCGGAACCTTGCCACCAAGGTTCACGCCAACAAGGGCAACGGCATCATCCCGACCCCCATCACGATGGACGAGCTCGA
GGACATGCTGATGGAGCACGGCATCATGAAGGCCGTCGACGAGAGCCAGGTCGGCAAGACCGCCGCCGAGCTCACCGCCT
GA

Upstream 100 bases:

>100_bases
CCGTAACCCGCGGGGCGTTTCCGACCGATATTGCTGACGAGAGAAACGGCCTCGCGCCACGCGCGCGGTGGTCTTCCGTA
TAGGTTCGAAGGAGAGACAG

Downstream 100 bases:

>100_bases
GGCTGACGACTTCGATGGGCCGGCCCCGTGCCGGCCCATCGCCCCGGACGCCGAGCCACGAGGCAAGCCGCACTGGTCTT
GCCACGAATATTTCAGAAGG

Product: nitrogenase reductase

Products: NA

Alternate protein names: Nitrogenase Fe protein 1; Nitrogenase component II; Nitrogenase reductase [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSSLRQIAFYGKGGIGKSTTSQNTLAALAQMGHKILIVGCDPKADSTRLILHAKAQDTILSLAANAGSVEDLELEDVMKI
GYQDIRCVESGGPEPGVGCAGRGVITSINFLEENGAYEDIDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMAMY
AANNISKGILKYANSGGVRLGGLVCNERQTDKELELAENLAKKLGTELIYFVPRDNIVQHAELRRMTVIEYAPDSEQAQH
YRNLATKVHANKGNGIIPTPITMDELEDMLMEHGIMKAVDESQVGKTAAELTA

Sequences:

>Translated_293_residues
MSSLRQIAFYGKGGIGKSTTSQNTLAALAQMGHKILIVGCDPKADSTRLILHAKAQDTILSLAANAGSVEDLELEDVMKI
GYQDIRCVESGGPEPGVGCAGRGVITSINFLEENGAYEDIDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMAMY
AANNISKGILKYANSGGVRLGGLVCNERQTDKELELAENLAKKLGTELIYFVPRDNIVQHAELRRMTVIEYAPDSEQAQH
YRNLATKVHANKGNGIIPTPITMDELEDMLMEHGIMKAVDESQVGKTAAELTA
>Mature_292_residues
SSLRQIAFYGKGGIGKSTTSQNTLAALAQMGHKILIVGCDPKADSTRLILHAKAQDTILSLAANAGSVEDLELEDVMKIG
YQDIRCVESGGPEPGVGCAGRGVITSINFLEENGAYEDIDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMAMYA
ANNISKGILKYANSGGVRLGGLVCNERQTDKELELAENLAKKLGTELIYFVPRDNIVQHAELRRMTVIEYAPDSEQAQHY
RNLATKVHANKGNGIIPTPITMDELEDMLMEHGIMKAVDESQVGKTAAELTA

Specific function: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components:the iron protein and the molybdenum-iron protein [H]

COG id: COG1348

COG function: function code P; Nitrogenase subunit NifH (ATPase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NifH/BchL/ChlL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000392
- InterPro:   IPR005977 [H]

Pfam domain/function: PF00142 Fer4_NifH [H]

EC number: =1.18.6.1 [H]

Molecular weight: Translated: 31692; Mature: 31560

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLRQIAFYGKGGIGKSTTSQNTLAALAQMGHKILIVGCDPKADSTRLILHAKAQDTIL
CCCHHEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCHHHHH
SLAANAGSVEDLELEDVMKIGYQDIRCVESGGPEPGVGCAGRGVITSINFLEENGAYEDI
HHHCCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCC
DYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMAMYAANNISKGILKYANSGGVRL
HHHHHHHHHHHHHCCEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCEEE
GGLVCNERQTDKELELAENLAKKLGTELIYFVPRDNIVQHAELRRMTVIEYAPDSEQAQH
EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHEEEEEECCCHHHHHH
YRNLATKVHANKGNGIIPTPITMDELEDMLMEHGIMKAVDESQVGKTAAELTA
HHHHHHEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure 
SSLRQIAFYGKGGIGKSTTSQNTLAALAQMGHKILIVGCDPKADSTRLILHAKAQDTIL
CCHHEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCHHHHH
SLAANAGSVEDLELEDVMKIGYQDIRCVESGGPEPGVGCAGRGVITSINFLEENGAYEDI
HHHCCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCC
DYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMAMYAANNISKGILKYANSGGVRL
HHHHHHHHHHHHHCCEECCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCEEE
GGLVCNERQTDKELELAENLAKKLGTELIYFVPRDNIVQHAELRRMTVIEYAPDSEQAQH
EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHEEEEEECCCHHHHHH
YRNLATKVHANKGNGIIPTPITMDELEDMLMEHGIMKAVDESQVGKTAAELTA
HHHHHHEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA