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The map label for this gene is yjbI [H]

Identifier: 154244090

GI number: 154244090

Start: 128388

End: 128822

Strand: Direct

Name: yjbI [H]

Synonym: Xaut_0132

Alternate gene names: 154244090

Gene position: 128388-128822 (Clockwise)

Preceding gene: 154244089

Following gene: 154244093

Centisome position: 2.42

GC content: 68.28

Gene sequence:

>435_bases
ATGTCCGACACGGTCGAGGCGGTACCCATGTTCGAGCGCCTGGGTGGTGCGGTGGTCATCGACCGGCTGGTCGAGGCCTT
CTACCGCCGCATGGATACGCTTGCGGAGGCCGAGGGCATCCGCGCCATGCATGCGGATGATCTTTCCCAGACCAAGCACG
TCTTGAAGCGCTACCTCACCGAATGGACCGGCGGCCCCAAGCTCTATTCGGTGGAAAAGGGCCATCCGCGCCTGCGCCAG
CGCCACATGGGCTTTGCCATCGGCAACGGCGAGCGCGACGCGTGGCTGCTGTGCATGCGCGGCGCGCTGGAGGAGACGGT
GGCGGACGCGGCGGCGCGGGACGAGGTCTATGGCGCCATGGCGAAGCTCGCCGACTGGATGCGCAACACCGCCGGCAATC
CCCACGATACCGCCGGCCACGCAGCCCGGCCCTGA

Upstream 100 bases:

>100_bases
CCGGCCGAGGTGATCCTTCTGCCCAATATGGACGAATAGTCGGCGTCTCCGCGTTACCGGACGACGTGTCTGCTGCAAAT
TCTATGCGTGAGGTTGACCC

Downstream 100 bases:

>100_bases
ATGTCAGGCGCGGTCCTGACGAAAGGTGCGGTTATGCCGACTGCTCAGGTGCCGCGCTAAAGCGGGACACCGAAGAAATC
CTCGTCTGATCCTCCCCAGG

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSDTVEAVPMFERLGGAVVIDRLVEAFYRRMDTLAEAEGIRAMHADDLSQTKHVLKRYLTEWTGGPKLYSVEKGHPRLRQ
RHMGFAIGNGERDAWLLCMRGALEETVADAAARDEVYGAMAKLADWMRNTAGNPHDTAGHAARP

Sequences:

>Translated_144_residues
MSDTVEAVPMFERLGGAVVIDRLVEAFYRRMDTLAEAEGIRAMHADDLSQTKHVLKRYLTEWTGGPKLYSVEKGHPRLRQ
RHMGFAIGNGERDAWLLCMRGALEETVADAAARDEVYGAMAKLADWMRNTAGNPHDTAGHAARP
>Mature_143_residues
SDTVEAVPMFERLGGAVVIDRLVEAFYRRMDTLAEAEGIRAMHADDLSQTKHVLKRYLTEWTGGPKLYSVEKGHPRLRQR
HMGFAIGNGERDAWLLCMRGALEETVADAAARDEVYGAMAKLADWMRNTAGNPHDTAGHAARP

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16023; Mature: 15892

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTVEAVPMFERLGGAVVIDRLVEAFYRRMDTLAEAEGIRAMHADDLSQTKHVLKRYLT
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EWTGGPKLYSVEKGHPRLRQRHMGFAIGNGERDAWLLCMRGALEETVADAAARDEVYGAM
HCCCCCEEEECCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLADWMRNTAGNPHDTAGHAARP
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDTVEAVPMFERLGGAVVIDRLVEAFYRRMDTLAEAEGIRAMHADDLSQTKHVLKRYLT
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EWTGGPKLYSVEKGHPRLRQRHMGFAIGNGERDAWLLCMRGALEETVADAAARDEVYGAM
HCCCCCEEEECCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLADWMRNTAGNPHDTAGHAARP
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]