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The map label for this gene is ydhD [C]

Identifier: 154244081

GI number: 154244081

Start: 123228

End: 123560

Strand: Reverse

Name: ydhD [C]

Synonym: Xaut_0123

Alternate gene names: 154244081

Gene position: 123560-123228 (Counterclockwise)

Preceding gene: 154244082

Following gene: 154244063

Centisome position: 2.33

GC content: 64.56

Gene sequence:

>333_bases
ATGGCCAGTTCAGCTGAACGTATCCAGGACATTATTTCATCCGCCGACGTGGTTCTCTTCATGAAGGGGGTGCCCGCGGC
TCCGCAGTGCGGCTTTTCCTCCGCCGTCGTGCAGGTGCTGGCCCAGGTCGGCGTGCCCTATCGCGCGGTTGACGTGCTGC
AGGACCCCTTCGTGCGCGAGGGGATCAAGGCCTTTTCCAACTGGCCGACCATTCCGCAGCTCTACATCAAGGGCGAATTC
GTCGGCGGCTGCGATATCGTGCGCGAGATGTTCCAGGCGGGCGAGCTGACCGCCCTCCTCGCCGAGAAGGGCGTGGCCGC
CCCCGTGGCTTGA

Upstream 100 bases:

>100_bases
GAAGCTGGAAACCCTCTCCCCGAAATAGGGCGCCCCGGCTCGGCCGCGCCGACGCCCGCATTTCTCTTTCAACGCCATTC
TTCGCACCGGAGTTGTTGCC

Downstream 100 bases:

>100_bases
TGCAGCTGTCCCGGCGCCCACTGGGAGCCGGGGTTTTAAAATGACGGCCCGCCCCGGCGCTCTTGCCGGCGGGCCTTTTT
CTTTGGCGCCGTTGTCTACG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MASSAERIQDIISSADVVLFMKGVPAAPQCGFSSAVVQVLAQVGVPYRAVDVLQDPFVREGIKAFSNWPTIPQLYIKGEF
VGGCDIVREMFQAGELTALLAEKGVAAPVA

Sequences:

>Translated_110_residues
MASSAERIQDIISSADVVLFMKGVPAAPQCGFSSAVVQVLAQVGVPYRAVDVLQDPFVREGIKAFSNWPTIPQLYIKGEF
VGGCDIVREMFQAGELTALLAEKGVAAPVA
>Mature_109_residues
ASSAERIQDIISSADVVLFMKGVPAAPQCGFSSAVVQVLAQVGVPYRAVDVLQDPFVREGIKAFSNWPTIPQLYIKGEFV
GGCDIVREMFQAGELTALLAEKGVAAPVA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=103, Percent_Identity=52.4271844660194, Blast_Score=119, Evalue=5e-28,
Organism=Homo sapiens, GI95113651, Length=95, Percent_Identity=50.5263157894737, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1787943, Length=102, Percent_Identity=49.0196078431373, Blast_Score=113, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=103, Percent_Identity=50.4854368932039, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988153, Length=88, Percent_Identity=47.7272727272727, Blast_Score=101, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71988159, Length=98, Percent_Identity=41.8367346938776, Blast_Score=98, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=53.8461538461538, Blast_Score=117, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320303, Length=86, Percent_Identity=47.6744186046512, Blast_Score=98, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=48.1927710843374, Blast_Score=96, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642023, Length=99, Percent_Identity=50.5050505050505, Blast_Score=119, Evalue=4e-28,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=42.1052631578947, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11655; Mature: 11523

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSAERIQDIISSADVVLFMKGVPAAPQCGFSSAVVQVLAQVGVPYRAVDVLQDPFVRE
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHH
GIKAFSNWPTIPQLYIKGEFVGGCDIVREMFQAGELTALLAEKGVAAPVA
HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASSAERIQDIISSADVVLFMKGVPAAPQCGFSSAVVQVLAQVGVPYRAVDVLQDPFVRE
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHH
GIKAFSNWPTIPQLYIKGEFVGGCDIVREMFQAGELTALLAEKGVAAPVA
HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]