| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244073
Identifier: 154244073
GI number: 154244073
Start: 118803
End: 119582
Strand: Direct
Name: 154244073
Synonym: Xaut_0115
Alternate gene names: NA
Gene position: 118803-119582 (Clockwise)
Preceding gene: 154244072
Following gene: 154244074
Centisome position: 2.24
GC content: 67.44
Gene sequence:
>780_bases ATGAAGACTGAAGACGACATCGACGAGGCCAAGACCTGGCTCGGGGAAGACGTCGATTGCTCCTCGTGCGCCCACCAGGA TCTCCTGGCGGAGGGAAAGTGCCATCTGGGGCGGGCCTGCGTGAACGATCGCTACGCCCGGCGCATCGACCGCTTCTTCA ACTGGAACCCGTCGCTCGCCAATTCCTATGTGCGGCACGACCATTTCGAGGTGCGGGCCATCGCGGCCAAGCACGCCGAC GTGTTCGTCCTGCCGCCGCTTCTCAACGACCCGGAGGAGACGGTGCGCTGGAACGCGGCGCGGCGTTTGCCCAAGACCAA GATCCTGCCGCTGCGCTACGATCCCCACCGGGAGGTGCGCATCCGCATCGTGTCGCTGCTGGAGGACGCCGACCTCTCTC CCATGATGGCGGACGAGGATTACTACGTGCGCCTGGTGGTGGCACGGCGCATCGCGCCGCCGTTGCTTTCGCGCATGGTG GACGATCCCGAGGCCGAGGTGCGCCGCGTGGTGGCCCAGCGCCTGCCGTCGGAATGGCTGTTGTGCATGGTCAACGACCG CAGCCCGCAGGTCCGCCTGGAGGTGGCCCAGCGCCTGGCGCCCGATCTTCTCTCCGCGCTCGTCGCCGATCCGGACTGGC GGGTGCGCTACGAGGTGGCGAGCCGCATTGCTCCCACCCAGGTGTCGCAGTTGATCGATGACGACGACGACTTCGTGCGC GAGGTCGCCCGGTCCCGCGCGCAGGCGGGCGGGGAGCTTTTGAGGGAGATGCCGCTATGA
Upstream 100 bases:
>100_bases GAGGGGCGGGCCGCGGCGATGAAGCTGCTCGAGCTCGATCCCACCGACAAGATCGGTGCCAAGCTCTTGCTCGACGTGCT GAACAGAGCGGGGCAGGACG
Downstream 100 bases:
>100_bases GCAACATTGTCCGTGACAGTGATGTGGTCGAAGTCTCAGAGCCGCCCTACTTCAATTTCGGCGAGAAGGTGAAGGCCAAG CGCGTCATTCGGAACGACGG
Product: LRV FeS4 cluster domain-containing protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKTEDDIDEAKTWLGEDVDCSSCAHQDLLAEGKCHLGRACVNDRYARRIDRFFNWNPSLANSYVRHDHFEVRAIAAKHAD VFVLPPLLNDPEETVRWNAARRLPKTKILPLRYDPHREVRIRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMV DDPEAEVRRVVAQRLPSEWLLCMVNDRSPQVRLEVAQRLAPDLLSALVADPDWRVRYEVASRIAPTQVSQLIDDDDDFVR EVARSRAQAGGELLREMPL
Sequences:
>Translated_259_residues MKTEDDIDEAKTWLGEDVDCSSCAHQDLLAEGKCHLGRACVNDRYARRIDRFFNWNPSLANSYVRHDHFEVRAIAAKHAD VFVLPPLLNDPEETVRWNAARRLPKTKILPLRYDPHREVRIRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMV DDPEAEVRRVVAQRLPSEWLLCMVNDRSPQVRLEVAQRLAPDLLSALVADPDWRVRYEVASRIAPTQVSQLIDDDDDFVR EVARSRAQAGGELLREMPL >Mature_259_residues MKTEDDIDEAKTWLGEDVDCSSCAHQDLLAEGKCHLGRACVNDRYARRIDRFFNWNPSLANSYVRHDHFEVRAIAAKHAD VFVLPPLLNDPEETVRWNAARRLPKTKILPLRYDPHREVRIRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMV DDPEAEVRRVVAQRLPSEWLLCMVNDRSPQVRLEVAQRLAPDLLSALVADPDWRVRYEVASRIAPTQVSQLIDDDDDFVR EVARSRAQAGGELLREMPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR004830 - InterPro: IPR008665 [H]
Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]
EC number: NA
Molecular weight: Translated: 29799; Mature: 29799
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEDDIDEAKTWLGEDVDCSSCAHQDLLAEGKCHLGRACVNDRYARRIDRFFNWNPSLA CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH NSYVRHDHFEVRAIAAKHADVFVLPPLLNDPEETVRWNAARRLPKTKILPLRYDPHREVR HHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHH IRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMVDDPEAEVRRVVAQRLPSEWL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEE LCMVNDRSPQVRLEVAQRLAPDLLSALVADPDWRVRYEVASRIAPTQVSQLIDDDDDFVR EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHCCCHHHHH EVARSRAQAGGELLREMPL HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTEDDIDEAKTWLGEDVDCSSCAHQDLLAEGKCHLGRACVNDRYARRIDRFFNWNPSLA CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH NSYVRHDHFEVRAIAAKHADVFVLPPLLNDPEETVRWNAARRLPKTKILPLRYDPHREVR HHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHH IRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMVDDPEAEVRRVVAQRLPSEWL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEE LCMVNDRSPQVRLEVAQRLAPDLLSALVADPDWRVRYEVASRIAPTQVSQLIDDDDDFVR EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHCCCHHHHH EVARSRAQAGGELLREMPL HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2836706 [H]