| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pyrE
Identifier: 154244015
GI number: 154244015
Start: 60356
End: 61054
Strand: Reverse
Name: pyrE
Synonym: Xaut_0057
Alternate gene names: 154244015
Gene position: 61054-60356 (Counterclockwise)
Preceding gene: 154244016
Following gene: 154244014
Centisome position: 1.15
GC content: 66.24
Gene sequence:
>699_bases ATGGCGAATGTCACTGCTTTTCCGGACAAGGCCACCATCGCCGAGCAGACCGCGCGGATGCTGCTGGAGGTGGAGGCCGT GCGCTTTTCCTCCGGCGAGCCGTTCATCTTCACCTCCGGCTGGGCCAGCCCGGTCTATATCGACTGCCGGCGCCTCATCT CCTTCCCCCGCGTGCGCCAGACGCTGGTGGACTTCGGCATCTCCACCATCTTCCGCGAGATCGGCTACGAGCAGTTCGAT ACCGTAGCCGGCGGCGAGACGGCGGGCATCCCCTTCGCAGCCTGGGTGGCGGACCGGCTGATGTTGCCCATGCAGTATGT GCGCAAGAAGCCCAAGGGCTTCGGGCGCAACGCACAGATCGAGGGACACCTGGCCCCCGGCCAGCGGGTGCTGCTGGTGG AGGACCTCACCACCGACGGCAAGAGCAAGGTGACCTTCGTCAACGCCCTGCGCGAGGCCGGGGCGGAGTGCTCGCACTGT TTCGTGTTCTTCTATTACGACATCTTCGCCGAGGCCTCGGGCATCTTCGACCAGGCCGGGCTCAGCCTGCACCGCCTCGC CACCTGGTGGGACGTGCTGGCGGCGGTGAAGACCATGAACCGGTTCGAATCCGCCCAGATCGCCGAGATCGAGTCCTTCC TCCACGATCCCCACTCCTGGTCGAAGGCCCACGGCGGCACCGCCGTCACCGGCGAGTGA
Upstream 100 bases:
>100_bases GCCTGCGGCTCATTTGCGTGCCTGCGGCGCCTGGGCTGTCGCATTAGGCCACGGCTCTGATATATGCGCGTCACATAATC GAGGCACCGAGGCCCTTCCC
Downstream 100 bases:
>100_bases CCGCGCGGATGGACCTCTACGGCGTCCTCAAGCCCCTGTTCCGGTTCATGACGCCGGAGCAGGCGCATCACCTGTCCATC CGCGTGTTGAAGAGCGGCCT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MANVTAFPDKATIAEQTARMLLEVEAVRFSSGEPFIFTSGWASPVYIDCRRLISFPRVRQTLVDFGISTIFREIGYEQFD TVAGGETAGIPFAAWVADRLMLPMQYVRKKPKGFGRNAQIEGHLAPGQRVLLVEDLTTDGKSKVTFVNALREAGAECSHC FVFFYYDIFAEASGIFDQAGLSLHRLATWWDVLAAVKTMNRFESAQIAEIESFLHDPHSWSKAHGGTAVTGE
Sequences:
>Translated_232_residues MANVTAFPDKATIAEQTARMLLEVEAVRFSSGEPFIFTSGWASPVYIDCRRLISFPRVRQTLVDFGISTIFREIGYEQFD TVAGGETAGIPFAAWVADRLMLPMQYVRKKPKGFGRNAQIEGHLAPGQRVLLVEDLTTDGKSKVTFVNALREAGAECSHC FVFFYYDIFAEASGIFDQAGLSLHRLATWWDVLAAVKTMNRFESAQIAEIESFLHDPHSWSKAHGGTAVTGE >Mature_231_residues ANVTAFPDKATIAEQTARMLLEVEAVRFSSGEPFIFTSGWASPVYIDCRRLISFPRVRQTLVDFGISTIFREIGYEQFDT VAGGETAGIPFAAWVADRLMLPMQYVRKKPKGFGRNAQIEGHLAPGQRVLLVEDLTTDGKSKVTFVNALREAGAECSHCF VFFYYDIFAEASGIFDQAGLSLHRLATWWDVLAAVKTMNRFESAQIAEIESFLHDPHSWSKAHGGTAVTGE
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=210, Percent_Identity=26.1904761904762, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17508631, Length=189, Percent_Identity=31.7460317460317, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17554964, Length=194, Percent_Identity=30.4123711340206, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17933654, Length=201, Percent_Identity=27.8606965174129, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 25751; Mature: 25619
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVTAFPDKATIAEQTARMLLEVEAVRFSSGEPFIFTSGWASPVYIDCRRLISFPRVRQ CCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHH TLVDFGISTIFREIGYEQFDTVAGGETAGIPFAAWVADRLMLPMQYVRKKPKGFGRNAQI HHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE EGHLAPGQRVLLVEDLTTDGKSKVTFVNALREAGAECSHCFVFFYYDIFAEASGIFDQAG EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHC LSLHRLATWWDVLAAVKTMNRFESAQIAEIESFLHDPHSWSKAHGGTAVTGE CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCEECCCC >Mature Secondary Structure ANVTAFPDKATIAEQTARMLLEVEAVRFSSGEPFIFTSGWASPVYIDCRRLISFPRVRQ CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHH TLVDFGISTIFREIGYEQFDTVAGGETAGIPFAAWVADRLMLPMQYVRKKPKGFGRNAQI HHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEE EGHLAPGQRVLLVEDLTTDGKSKVTFVNALREAGAECSHCFVFFYYDIFAEASGIFDQAG EEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHC LSLHRLATWWDVLAAVKTMNRFESAQIAEIESFLHDPHSWSKAHGGTAVTGE CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA