Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yvgK [H]

Identifier: 154244006

GI number: 154244006

Start: 51711

End: 52601

Strand: Reverse

Name: yvgK [H]

Synonym: Xaut_0048

Alternate gene names: 154244006

Gene position: 52601-51711 (Counterclockwise)

Preceding gene: 154244008

Following gene: 154244004

Centisome position: 0.99

GC content: 70.59

Gene sequence:

>891_bases
ATGTCGGATTTCCTGACCACCCGCGAGCTGGCGGCGCTGCTGCGCGTGAAGGAGCGCAAGGTCTACGATCTGGTGGCGAC
GGGCAGTCTCCCGGTCCGGCGGGTGACGGGCAAACTGCTGTTTCCGCGCAAGGAAATCGAGAGCTGGCTGGGAGGCGCCA
CTGAACCGCGCGAGGCCGGGGAGACCCAGGCGCCGGGCGAGCGTGCACCCTTCCCGCTCGTTCTCGCCGGCGGGCACGAC
CCCCTGCTCGACTGGGCGCTGCGCGAATCGCGCTCCGGCATCGCCGCCTTCCTCGACGGCGCGCTCGATGGGCTCGCCCG
CGCCGAGCGAGGCGAATGCATCGCCGTGGGCCTGCACGTGCCCGATCCACAGGGCTGGAACGTGGGTACGGTGGAAGGCC
GCTTCTGCCGCGAGCCATGGGTGCTGATCGAATGGGCCCGGCGGGTGCGCGGCCTCCTCTACCGGCCCGATATCGCCCGT
CCTCCCAAAAGCCTGAAAGATGTCCGGGGCCTGCGCTTCCAGGCGCGGCAGCCGGAAGCCGGCAGCGAGCTGGTGCTGGA
CCGGCTGTTGTCCGCCGAGAAGATGGTGCGCGCCGACCTCCGGGTAGTGGACGCCGTCGAGCGGACCGAGACCGACCTGG
CGCTGGCCATCGCCGCCGGGCGGGCGGACGTGGGGCTCGGCATCGCCGCGGCGGCGCGCCTTCACAATCTGCGCTTCCTG
CCGCTGCTGGAGGAGCGCTTCGACCTCCTGGTCTGGCGCAAGGCCTATTTCGATCCGCCGTTCCAGAAGCTGGTGGCATT
CTGCCGCGCGCCCGCCTTCGAGGCCCGCGCCGCCGATCTCGGCGGCTATGACGTGTCCGGCTTCGGGACGGTCCATTACA
ATTGCTGCTGA

Upstream 100 bases:

>100_bases
GCAGCGATAGAGGTTGAATTTCGCGTGAAACCGTATTCATGTGAATATAGGTGAAACGTGTCGTTTTTTTCGGGTTCCTG
CCGTGACGGTGCATCGGAGC

Downstream 100 bases:

>100_bases
ACCGGCCCCCGGGCCGAAAAGAAACGCCCGCCCGTAAACCGGGCGGGCGCAAGGTCCTCTGGGGGACAGGTGTCTGCGGT
CAGGCCGCCTCCACCGGTGG

Product: DNA binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHD
PLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIAR
PPKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL
PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC

Sequences:

>Translated_296_residues
MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHD
PLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIAR
PPKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL
PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC
>Mature_295_residues
SDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHDP
LLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARP
PKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFLP
LLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010093 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32720; Mature: 32589

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAG
CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCC
ETQAPGERAPFPLVLAGGHDPLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHV
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARPPKSLKDVRGLRFQARQPEA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCCEEECCCCCC
GSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEC
PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAG
CCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCC
ETQAPGERAPFPLVLAGGHDPLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHV
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARPPKSLKDVRGLRFQARQPEA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCCEEECCCCCC
GSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEC
PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]