| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yvgK [H]
Identifier: 154244006
GI number: 154244006
Start: 51711
End: 52601
Strand: Reverse
Name: yvgK [H]
Synonym: Xaut_0048
Alternate gene names: 154244006
Gene position: 52601-51711 (Counterclockwise)
Preceding gene: 154244008
Following gene: 154244004
Centisome position: 0.99
GC content: 70.59
Gene sequence:
>891_bases ATGTCGGATTTCCTGACCACCCGCGAGCTGGCGGCGCTGCTGCGCGTGAAGGAGCGCAAGGTCTACGATCTGGTGGCGAC GGGCAGTCTCCCGGTCCGGCGGGTGACGGGCAAACTGCTGTTTCCGCGCAAGGAAATCGAGAGCTGGCTGGGAGGCGCCA CTGAACCGCGCGAGGCCGGGGAGACCCAGGCGCCGGGCGAGCGTGCACCCTTCCCGCTCGTTCTCGCCGGCGGGCACGAC CCCCTGCTCGACTGGGCGCTGCGCGAATCGCGCTCCGGCATCGCCGCCTTCCTCGACGGCGCGCTCGATGGGCTCGCCCG CGCCGAGCGAGGCGAATGCATCGCCGTGGGCCTGCACGTGCCCGATCCACAGGGCTGGAACGTGGGTACGGTGGAAGGCC GCTTCTGCCGCGAGCCATGGGTGCTGATCGAATGGGCCCGGCGGGTGCGCGGCCTCCTCTACCGGCCCGATATCGCCCGT CCTCCCAAAAGCCTGAAAGATGTCCGGGGCCTGCGCTTCCAGGCGCGGCAGCCGGAAGCCGGCAGCGAGCTGGTGCTGGA CCGGCTGTTGTCCGCCGAGAAGATGGTGCGCGCCGACCTCCGGGTAGTGGACGCCGTCGAGCGGACCGAGACCGACCTGG CGCTGGCCATCGCCGCCGGGCGGGCGGACGTGGGGCTCGGCATCGCCGCGGCGGCGCGCCTTCACAATCTGCGCTTCCTG CCGCTGCTGGAGGAGCGCTTCGACCTCCTGGTCTGGCGCAAGGCCTATTTCGATCCGCCGTTCCAGAAGCTGGTGGCATT CTGCCGCGCGCCCGCCTTCGAGGCCCGCGCCGCCGATCTCGGCGGCTATGACGTGTCCGGCTTCGGGACGGTCCATTACA ATTGCTGCTGA
Upstream 100 bases:
>100_bases GCAGCGATAGAGGTTGAATTTCGCGTGAAACCGTATTCATGTGAATATAGGTGAAACGTGTCGTTTTTTTCGGGTTCCTG CCGTGACGGTGCATCGGAGC
Downstream 100 bases:
>100_bases ACCGGCCCCCGGGCCGAAAAGAAACGCCCGCCCGTAAACCGGGCGGGCGCAAGGTCCTCTGGGGGACAGGTGTCTGCGGT CAGGCCGCCTCCACCGGTGG
Product: DNA binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHD PLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIAR PPKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC
Sequences:
>Translated_296_residues MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHD PLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIAR PPKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC >Mature_295_residues SDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAGETQAPGERAPFPLVLAGGHDP LLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHVPDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARP PKSLKDVRGLRFQARQPEAGSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFLP LLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32720; Mature: 32589
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAG CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCC ETQAPGERAPFPLVLAGGHDPLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHV CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC PDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARPPKSLKDVRGLRFQARQPEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCCEEECCCCCC GSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEC PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEECC >Mature Secondary Structure SDFLTTRELAALLRVKERKVYDLVATGSLPVRRVTGKLLFPRKEIESWLGGATEPREAG CCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHCC ETQAPGERAPFPLVLAGGHDPLLDWALRESRSGIAAFLDGALDGLARAERGECIAVGLHV CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC PDPQGWNVGTVEGRFCREPWVLIEWARRVRGLLYRPDIARPPKSLKDVRGLRFQARQPEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHCCEEECCCCCC GSELVLDRLLSAEKMVRADLRVVDAVERTETDLALAIAAGRADVGLGIAAAARLHNLRFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEC PLLEERFDLLVWRKAYFDPPFQKLVAFCRAPAFEARAADLGGYDVSGFGTVHYNCC HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]