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The map label for this gene is ybhR [C]

Identifier: 154243983

GI number: 154243983

Start: 24850

End: 25722

Strand: Reverse

Name: ybhR [C]

Synonym: Xaut_0025

Alternate gene names: 154243983

Gene position: 25722-24850 (Counterclockwise)

Preceding gene: 154243984

Following gene: 154243982

Centisome position: 0.48

GC content: 66.32

Gene sequence:

>873_bases
ATGACCGACACCGTGCTGCCGCCCCACGTCCTCGCCCCGCCCGTCGCCCGCCCGCTGGGCCTGGCCGGCCATGCGGTATG
CCTTGGCGGCATCGTGAACCGCGAGCTGCTGCGCTTCGTGCAGCAGAAGGAGCGCTTCCTCTCCGCTCTGGTGCGGCCGC
TGGTGTGGCTGTTCATCTTCGCAGCCGGCTTCCGCAGCGTTTTGGGCGTGTCCATCATCCCGCCCTACGACACCTATGTG
CTGTACGAGGTCTATGTGACGCCCGGCCTCGCGGTGATGATCCAGCTGTTCAACGGCATGCAGTCCTCCCTCTCCATGGT
CTACGACCGGGAGGTCGGCTCCATGCGGGTGCTGCTCACCAGCCCGTTCCCGCGCTGGTTCCTGCTCTTGTCGAAGCTGG
TGGCGGGCGTGGTGGTGTCGCTGGCGCAGGTCTATGTGTTCCTCGCCATCGCCCGGCTGTGGGAGGTGGAGATGCCGCCC
ATCGGCTACCTCGCGGCGCTGCCCGCCTTCATCCTCACCGGGCTGATGCTGGGCTCCATCGGGCTGGTCATCTCCTCGCT
GATCCGGCAGCTGGAGAATTTCGCCAGCGTGATGAACTTCGTCATCTTCCCCATGTTCTTCGCCTCCTCCGCCCTCTACC
CCCTGTGGCGGGTGCGCGACGCGAGCGAGACGCTCTACATCGTCTGTATGGTCAATCCCTTCACCCATGCGGTGGAGCTG
GTGCGCAACGCGCTCTACGGCGTGTTCGAGCCCACCTCCTTCGCCGTCGTGCTCGGCACCACCATCGTCTTCTTCGCCCT
CGCCGTCGTCGCCTATGATCCCGGGCGCGGCATCATGGGGCGGCGTGGCGGTCCCAAAGGAGAAGCCGCGTGA

Upstream 100 bases:

>100_bases
GAGGCGGAACCTGTCCCCGAGGGCGGCACGGCCGCGCTGGAAGCCGCCTTCCGCGCCATGACGGCGGCCCGCGCCGGGGA
TGCGGCATGAGGACACCAGC

Downstream 100 bases:

>100_bases
TACGCTCCGTTTCGCTCCCCCTCATCGCCGCCGGCCTGCTCCTGGCGGCATCCCTGCCGGCGCTGGCCCAGCCCAAGGCC
GACCCGGACTGGCCATGCAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Efflux ABC Transporter Permease Protein; ABC Transporter; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Superfamily; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; Daunorubicin Resistance Membrane Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Antibiotic ABC Transporter Transmembrane Protein; Daunorubicin Resistance ABC Transporter Permease; ABC Efflux Transporter Permease Protein; ABC-Type Multidrug Transport System; ABC Efflux Pump Inner Membrane Subunit; Multidrug ABC Transporter Permease; Drug ABC Transporter Membrane Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; Daunorubicin Resistance ABC Transporter Permease Protein; ABC-2 Transporter Component; Daunorubicin Resistance Transmembrane Protein; Transporter ABC-2 Integral Membrane Protein Family; ABC Type Transporter Permease Component; Antibiotic Export Permease Protein; ABC-Type Multidrug Transport System Permease; Antibiotic Resistance ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTDTVLPPHVLAPPVARPLGLAGHAVCLGGIVNRELLRFVQQKERFLSALVRPLVWLFIFAAGFRSVLGVSIIPPYDTYV
LYEVYVTPGLAVMIQLFNGMQSSLSMVYDREVGSMRVLLTSPFPRWFLLLSKLVAGVVVSLAQVYVFLAIARLWEVEMPP
IGYLAALPAFILTGLMLGSIGLVISSLIRQLENFASVMNFVIFPMFFASSALYPLWRVRDASETLYIVCMVNPFTHAVEL
VRNALYGVFEPTSFAVVLGTTIVFFALAVVAYDPGRGIMGRRGGPKGEAA

Sequences:

>Translated_290_residues
MTDTVLPPHVLAPPVARPLGLAGHAVCLGGIVNRELLRFVQQKERFLSALVRPLVWLFIFAAGFRSVLGVSIIPPYDTYV
LYEVYVTPGLAVMIQLFNGMQSSLSMVYDREVGSMRVLLTSPFPRWFLLLSKLVAGVVVSLAQVYVFLAIARLWEVEMPP
IGYLAALPAFILTGLMLGSIGLVISSLIRQLENFASVMNFVIFPMFFASSALYPLWRVRDASETLYIVCMVNPFTHAVEL
VRNALYGVFEPTSFAVVLGTTIVFFALAVVAYDPGRGIMGRRGGPKGEAA
>Mature_289_residues
TDTVLPPHVLAPPVARPLGLAGHAVCLGGIVNRELLRFVQQKERFLSALVRPLVWLFIFAAGFRSVLGVSIIPPYDTYVL
YEVYVTPGLAVMIQLFNGMQSSLSMVYDREVGSMRVLLTSPFPRWFLLLSKLVAGVVVSLAQVYVFLAIARLWEVEMPPI
GYLAALPAFILTGLMLGSIGLVISSLIRQLENFASVMNFVIFPMFFASSALYPLWRVRDASETLYIVCMVNPFTHAVELV
RNALYGVFEPTSFAVVLGTTIVFFALAVVAYDPGRGIMGRRGGPKGEAA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31838; Mature: 31707

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTVLPPHVLAPPVARPLGLAGHAVCLGGIVNRELLRFVQQKERFLSALVRPLVWLFIF
CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGFRSVLGVSIIPPYDTYVLYEVYVTPGLAVMIQLFNGMQSSLSMVYDREVGSMRVLLT
HHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SPFPRWFLLLSKLVAGVVVSLAQVYVFLAIARLWEVEMPPIGYLAALPAFILTGLMLGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GLVISSLIRQLENFASVMNFVIFPMFFASSALYPLWRVRDASETLYIVCMVNPFTHAVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHH
VRNALYGVFEPTSFAVVLGTTIVFFALAVVAYDPGRGIMGRRGGPKGEAA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDTVLPPHVLAPPVARPLGLAGHAVCLGGIVNRELLRFVQQKERFLSALVRPLVWLFIF
CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGFRSVLGVSIIPPYDTYVLYEVYVTPGLAVMIQLFNGMQSSLSMVYDREVGSMRVLLT
HHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SPFPRWFLLLSKLVAGVVVSLAQVYVFLAIARLWEVEMPPIGYLAALPAFILTGLMLGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GLVISSLIRQLENFASVMNFVIFPMFFASSALYPLWRVRDASETLYIVCMVNPFTHAVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHH
VRNALYGVFEPTSFAVVLGTTIVFFALAVVAYDPGRGIMGRRGGPKGEAA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA