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The map label for this gene is bioC [H]

Identifier: 153952564

GI number: 153952564

Start: 1468744

End: 1469430

Strand: Direct

Name: bioC [H]

Synonym: JJD26997_1661

Alternate gene names: 153952564

Gene position: 1468744-1469430 (Clockwise)

Preceding gene: 153951131

Following gene: 153951446

Centisome position: 79.6

GC content: 24.16

Gene sequence:

>687_bases
TTGAATTTTTTAAAAGCAAAAGATTATGAAAAACATGCAAAAGTGCAAGATTTTATGGGTTTAAAACTTTGTGAAATTTT
AAAAGATTTAAAAATTTCACATTTTAAAAAAGTGTTTGAATTTGGTTGTGGCAGGGGTGAATTGAGCAAAAAACTTCAAA
ATTTTATTACTTTTGATGAGTATTTAAAAAACGATATTTTAGATTTTAAAGAAAATTCTAATATTTTAATTTTTGATATG
AACGAAATTGCAAAACAGGATTTAAGTAAAGAGAAATTTGATCTTATTGTTTCAAATGCGACTTTGCAATGGCTTGATTT
AAAACGCATTTTACCAAGCCTTAGGGATATGCTGAATCAAAATGGGATTTTACTTCTTTCTACTTTTGCAGAGCAAAATT
TAAAAGAAATCAAGCAAAGCACGGGTTTTGGTTTAAATTATTTTAGCTTAAATGAATTAGAGCAAATTTTTAAAGTCTAT
TTTGATGAGATAAAAATCACTCAAGAACTTGTAGAATTAAATTTTGATAATGCTTTAGAAGTTTTTAGACATTTAAAATT
AAGCGGAGTAAATTCTTTAGGTTTTTATCCTTTAAATAAATGTTTTTTAAAAGATTTTGAAGAAAAATTTCAAAACAAAC
TCACTTATCATCCTGTATTTATTTTATGCAAAAATGATATAAAATGA

Upstream 100 bases:

>100_bases
AAATTTTTCCACCAAATGCTTTAAAAAATGCTTTTTCAAAACTTATTTTTTTAAATGAACCGCATTTTGCTTTTTTTCAT
TTTAAAACTTGGGATGAAAT

Downstream 100 bases:

>100_bases
ATTTTTGTGTTATAATCCAAAAATTAAATTTTTACACAAGGAAAACTAAATGAAAAAGTTTATAGTATTTTTTGGGATTT
TGTTTTTTACCTTACATCTA

Product: biotin biosynthesis protein BioC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFKKVFEFGCGRGELSKKLQNFITFDEYLKNDILDFKENSNILIFDM
NEIAKQDLSKEKFDLIVSNATLQWLDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
FDEIKITQELVELNFDNALEVFRHLKLSGVNSLGFYPLNKCFLKDFEEKFQNKLTYHPVFILCKNDIK

Sequences:

>Translated_228_residues
MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFKKVFEFGCGRGELSKKLQNFITFDEYLKNDILDFKENSNILIFDM
NEIAKQDLSKEKFDLIVSNATLQWLDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
FDEIKITQELVELNFDNALEVFRHLKLSGVNSLGFYPLNKCFLKDFEEKFQNKLTYHPVFILCKNDIK
>Mature_228_residues
MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFKKVFEFGCGRGELSKKLQNFITFDEYLKNDILDFKENSNILIFDM
NEIAKQDLSKEKFDLIVSNATLQWLDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
FDEIKITQELVELNFDNALEVFRHLKLSGVNSLGFYPLNKCFLKDFEEKFQNKLTYHPVFILCKNDIK

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26867; Mature: 26867

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFKKVFEFGCGRGELSKKLQNFITFDE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YLKNDILDFKENSNILIFDMNEIAKQDLSKEKFDLIVSNATLQWLDLKRILPSLRDMLNQ
HHHHHHHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVYFDEIKITQELVELNFDNALE
CCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VFRHLKLSGVNSLGFYPLNKCFLKDFEEKFQNKLTYHPVFILCKNDIK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFKKVFEFGCGRGELSKKLQNFITFDE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YLKNDILDFKENSNILIFDMNEIAKQDLSKEKFDLIVSNATLQWLDLKRILPSLRDMLNQ
HHHHHHHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
NGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVYFDEIKITQELVELNFDNALE
CCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VFRHLKLSGVNSLGFYPLNKCFLKDFEEKFQNKLTYHPVFILCKNDIK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]