| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153952398
Identifier: 153952398
GI number: 153952398
Start: 1810311
End: 1811582
Strand: Direct
Name: 153952398
Synonym: JJD26997_2059
Alternate gene names: NA
Gene position: 1810311-1811582 (Clockwise)
Preceding gene: 153952397
Following gene: 153951766
Centisome position: 98.11
GC content: 31.92
Gene sequence:
>1272_bases ATGAATGGCAAAACTTATAAATTTCATCCAAATGATACAAAAATGGATAAAAAAATAATTCAAATTACCGAAAAATCCGG ATTTAAAGCAGCTGTGTTTTCTATGGCCGCTATGACTATGCTAGGAAGTGTAGTCATTTCATCTGCTCTACCTGCTATCA ACAGACATTTTGAAGAACTTTTAACCCAAAGTGGTGCTACTCTTGCTTCAAGTTTCACATTAGCTCATCTTGATATACTT GTTCGCTTAGTTTTAACCATCCCTGCTATTTTTGTTGTCATTTTATCTCCATTTGCTGGTATTTTAATGGATAAATTTGG CAAATTAAAATTCATTCTTCCGGCTATGGTGGTTTGGACTATTTCTGGGATAAGTGGTTTTTTCTTAAATGATATTTATG CTATACTGACTTCAAGAGCTATCTTTGGTATAGCAACTGCTTTTATAATGACAGGTGCTTCAGCCTTGCTTGGAGATTAT TATAGTCGTGGTGGCTTTAATCGCAGAGAAAATGCTTTAAGTCTTCAAGGATTTTTTTGTGCGGTAGGGGGTGCTGTTTT TATTTCTATTGCAGGATTTGTTTCGAGTTATTCTTGGCGCTATCCTTTTTTGGTATATGGGCTTGGAATTTTAATTACCT TAATGGCTATCATTTATCTTTTTGAACCTAGAAAATTTAAATTCTATAATCATACAAAAATAGAAGCAAAAACAAATTAT TGGCAATTTTTTCCTATCTATTTTATAGGTTTTTTTATCATGGTGGTTTATTATATTTCACCAACTCAACTCCCTTACTA TATAGAAGAACATTTAGGATTGGATCCTAAATATATAGGTATTTCGATGTCTGTATCTGCGCTATGTTATGGTTTTTTCT CTCTAAGCTATAGACACATTATAAAATTCTTAAGTATTAAAACTATCTATGTTTTAACTCTTTTTATCGTATCTTGTTCT TTTTTGCTGCTTTTTTTGGTAGATAGTTTTTTCACAGTTTTAATCGCCTTAGCCCTACTTGGAATGGGCGGAGGTATTAT GCTTGTAAATAATACGGCTTATCTTTTTTCAATCTGTCCTGAAAATGCTCGCGCTAGGGCTTATGGAATTTTAGCAAGTT GTATATTTTTAGGACAATTTTTAAGTCCTATTATCTCTCAACCTATCGTTAGGCAAATGGGTCTTGTAGATGCTTTTTTA ATATGGTCAATAGTAATTTTTATAGTATGCATTGTGTTTTTATTTTTAAAGCAAAAACCTAGGATAAATTAA
Upstream 100 bases:
>100_bases AACAAAACTATCATAACAAAATAAATAAAATATAATTTTAAGTAATTTTAAATACAAATCATAATTTTTGGAGTATAATA AAATAAAAAAGGCAAAAATT
Downstream 100 bases:
>100_bases TTTAATTAATTATATTCTTCATAATTTTTAATTAAACCTGATAAATTTAGGTTTAATCATTTAGGATTTACAAACTCTTT CTTAGAGTTTTATAATTATA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; MFS Permease; Facilitator Family Protein; Facilitator Family Transporter; Transporter Facilitator Family; Facilitator Family Multidrug Efflux Transporter; Multidrug ABC Transporter; Efflux Protein; MFS Transport System Component; Facilitator Superfamily Transporter; Facilitator Superfamily Efflux Protein; Permease MFS Family; Transporter-Like Membrane Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGIATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIEAKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRHIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN
Sequences:
>Translated_423_residues MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGIATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIEAKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRHIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN >Mature_423_residues MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEELLTQSGATLASSFTLAHLDIL VRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGIATAFIMTGASALLGDY YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIEAKTNY WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRHIIKFLSIKTIYVLTLFIVSCS FLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFL IWSIVIFIVCIVFLFLKQKPRIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47339; Mature: 47339
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEEL CCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ISGISGFFLNDIYAILTSRAIFGIATAFIMTGASALLGDYYSRGGFNRRENALSLQGFFC HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIEAKTNY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCC WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRHI EEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH IKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECC ENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFLIWSIVIFIVCIVFLFLKQKP CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RIN CCC >Mature Secondary Structure MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVVISSALPAINRHFEEL CCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGILMDKFGKLKFILPAMVVWT HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ISGISGFFLNDIYAILTSRAIFGIATAFIMTGASALLGDYYSRGGFNRRENALSLQGFFC HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAIIYLFEPRKFKFYNHTKIEAKTNY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCC WQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDPKYIGISMSVSALCYGFFSLSYRHI EEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH IKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVLIALALLGMGGGIMLVNNTAYLFSICP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECC ENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAFLIWSIVIFIVCIVFLFLKQKP CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RIN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA