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The map label for this gene is 153952355

Identifier: 153952355

GI number: 153952355

Start: 774850

End: 775710

Strand: Direct

Name: 153952355

Synonym: JJD26997_0872

Alternate gene names: NA

Gene position: 774850-775710 (Clockwise)

Preceding gene: 153952537

Following gene: 153951915

Centisome position: 41.99

GC content: 24.39

Gene sequence:

>861_bases
ATGAAACTTAAAAATACTACAATAATCGAAGATTTAGAGCGTTGGATAGAAGCTTATTTGAAACATATTCAAGCATTATC
CTATTCAAATAATACTTTTTTACTTTATAGGCGTATTTTACTAGAATTTGTAGAATATTCTTTAGATTATCAAGATGAAA
TGCAAATAAATGATATAAAAACGACTTTTTTAGTCAATTTTCTTAATTATTTAGAAAATAATTCAAAAAATGGAAATAAA
TTATCAAAAAAAACAAAAATAACTTATTTGAGAGTATTAACTAGCTTTTTTTATTTTATAAGCGATAATAATGATGATTT
GTTTATTTTTTCCTTTGATATGAAGAAAATTAGATTTAGAACAGAAAAAGCAGAGGAAAAATTGAATTATCTTAATGAAA
ATGAAATTATAAGGCTAAATAATGTTTTAGAGAAAGAAAAAGCAAAAAAAGAAGTTTATAATAGTTTTAGAAACTCTTTG
CTGATAAAACTTATGCTTTATGGAGGACTTAGAATTTCTGAAGCTTTAAATGTAAAACTTTGTGATTTTGAAGAAGTTGA
TGATGAACTTGAATATTTTAAAGAAAATATCCAAGATAGTGATTACATAATGCAAACTAGCACAGGAAAACATTTAAATA
GAAGTAATGCTTTTTTGATTGTAAATAATATTTATGCTAAAGCTTTGATCAGTAAAAAAGGACTTCATTTGCTTAGACAC
ACTTTAGCCATGAGATTAACAGCCAAAGGAACAAACCTTGTGGTCATACAAAAAATTCTAAGACATGCAAATCTAAATAC
CACTACTATATATGCCAAAGCAACAAATGATACAATAAAAGCTGCGTTATTGAATAATTAA

Upstream 100 bases:

>100_bases
GTCAAAATAAGCCTATTAAAAAATATATTTTGATATTAACACAAGCAAATAAATATAACATAATATACTATTATGTTATA
AAAAAAAGGATATAGATAAA

Downstream 100 bases:

>100_bases
TTTTTATAAAATTAAGTATTTACATAGACTTCTTTTTGAAGTCTATGTTGTGAATCTTTCTAATAAAAGTTTAGGTTCTC
CGCCAAGTATTTTAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLKNTTIIEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFVEYSLDYQDEMQINDIKTTFLVNFLNYLENNSKNGNK
LSKKTKITYLRVLTSFFYFISDNNDDLFIFSFDMKKIRFRTEKAEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSL
LIKLMLYGGLRISEALNVKLCDFEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRH
TLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN

Sequences:

>Translated_286_residues
MKLKNTTIIEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFVEYSLDYQDEMQINDIKTTFLVNFLNYLENNSKNGNK
LSKKTKITYLRVLTSFFYFISDNNDDLFIFSFDMKKIRFRTEKAEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSL
LIKLMLYGGLRISEALNVKLCDFEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRH
TLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN
>Mature_286_residues
MKLKNTTIIEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFVEYSLDYQDEMQINDIKTTFLVNFLNYLENNSKNGNK
LSKKTKITYLRVLTSFFYFISDNNDDLFIFSFDMKKIRFRTEKAEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSL
LIKLMLYGGLRISEALNVKLCDFEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRH
TLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33666; Mature: 33666

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKNTTIIEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFVEYSLDYQDEMQINDIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH
TTFLVNFLNYLENNSKNGNKLSKKTKITYLRVLTSFFYFISDNNDDLFIFSFDMKKIRFR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECHHHHHHH
TEKAEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSLLIKLMLYGGLRISEALNVKL
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHCCEEE
CDFEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
TLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN
HHHHHEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MKLKNTTIIEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFVEYSLDYQDEMQINDIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH
TTFLVNFLNYLENNSKNGNKLSKKTKITYLRVLTSFFYFISDNNDDLFIFSFDMKKIRFR
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECHHHHHHH
TEKAEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSLLIKLMLYGGLRISEALNVKL
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHCCEEE
CDFEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
TLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN
HHHHHEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]