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The map label for this gene is pgbB [H]

Identifier: 153952197

GI number: 153952197

Start: 1379553

End: 1380551

Strand: Direct

Name: pgbB [H]

Synonym: JJD26997_1561

Alternate gene names: 153952197

Gene position: 1379553-1380551 (Clockwise)

Preceding gene: 153951242

Following gene: 153952336

Centisome position: 74.77

GC content: 27.63

Gene sequence:

>999_bases
ATGAAAAAAATATTTTTAACACTATTTTGTTTAATATTTCTATGTGCTTGTGGCACCAAAAGACAATATTTTGAACCAAA
ACAAACTGATGGAGATTTAAGTCATAATAGCAATTTAAAAAGTAAAATCGTTGATTGGAATCTAGTTTCTGCAAAACTTA
GCAATAATACCGCTATCTTAAAAAATAATATTTCTATAGACAAGTTTAAACTTCCTAAAAATTATATGCTTTTAACTTAT
CAAGATGGGGAATATTTTACTGCAGATAATAATGGAAATTTAAAAATTTTTGACAATTCTTATAATGAAATTTATAGTTT
TCAATTTGACTCTAGTGTTGTAGGAGTAGCTTCTAATGGAGATGATTTAGCCCTTGTACTTGCAAATAATACTATAGTTC
TTGCAAATCGTTCTTTGGGTATTAAATTCAGTCAAACCCTAACCTCAGCTCCAGCTCAAGACAGTCGTACCGCTAATCCT
ATATTTTTAGACAATATCATCGTATATCCAACACTAGATGGCAAAATTTTAATTCTTTCAAGAAACAATCTTCAAGTCAT
TAAAGATGTGGTTATTTCAGCAGAAAATTTTTTCAACAATGTAATCCATCTAAGCGTAATCGGAGATAAACTTATAGCAG
CAACAGCTAAAAAAATCATTGTTGTAAGCCCTGCTAGAACTCTTTATCTTGACGCTGACATAAAAGATGTTGCACTTAGT
GATGATGGTATTTTTATACTAGAAAAAGATGGCACTATTATTAAAACTGATTATAACCTAAGAAAAATTGCAGAAAAAAA
ATTTGAATTTGCTATTTTTATAAAAAGTAATATATACAATAATTATTTATATATTTTTGAAAAAACAGGCTATCTTATCA
AAATGAATCTAAATTTAGATAATGCACAAGTATTTCAACTTTCAGAAGCTGTTGATAAAATTTCTTTCATGGGGAATGGT
AAATTTTACTACGGAGATAAAATTTTAGATTTGCTATGA

Upstream 100 bases:

>100_bases
ATAAAATCGAAGAAGCTAATGTTTTGCTTTCTCAGATAAAAGAAAATTCAAGCTTAAATCAAATAGCTAAAAATCTCAAA
CATTATCAAGGCATTACACA

Downstream 100 bases:

>100_bases
TAGAAATTTTAGAACAAACAATAAAGGCTTTAAAATTAAATTTAAAGCCCTATGACTTAAGTATGTTGACTAGAAAAAAA
GTTATATTTGCGCCAAAGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVDWNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLTY
QDGEYFTADNNGNLKIFDNSYNEIYSFQFDSSVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVVSPARTLYLDADIKDVALS
DDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFIKSNIYNNYLYIFEKTGYLIKMNLNLDNAQVFQLSEAVDKISFMGNG
KFYYGDKILDLL

Sequences:

>Translated_332_residues
MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVDWNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLTY
QDGEYFTADNNGNLKIFDNSYNEIYSFQFDSSVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVVSPARTLYLDADIKDVALS
DDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFIKSNIYNNYLYIFEKTGYLIKMNLNLDNAQVFQLSEAVDKISFMGNG
KFYYGDKILDLL
>Mature_332_residues
MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVDWNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLTY
QDGEYFTADNNGNLKIFDNSYNEIYSFQFDSSVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVVSPARTLYLDADIKDVALS
DDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFIKSNIYNNYLYIFEKTGYLIKMNLNLDNAQVFQLSEAVDKISFMGNG
KFYYGDKILDLL

Specific function: Binds plasminogen, specifically, and in a concentration and lysine-dependent manner. Plasminogen is the precursor of plasmin, a serine protease that cleaves fibrin, fibronectin, laminin and vitronectin. Acquisition of plasminogen/plasmin could enable H.py

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface (Probable). Note=The plasminogen-binding region is localized on the surface the bacterium (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015943
- InterPro:   IPR011046 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37373; Mature: 37373

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVDWNLVSAKLSNNTAIL
CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEECCCEEEE
KNNISIDKFKLPKNYMLLTYQDGEYFTADNNGNLKIFDNSYNEIYSFQFDSSVVGVASNG
ECCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEEECCEEEEEECCC
DDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANPIFLDNIIVYPTLDGKILILS
CCEEEEEECCEEEEEECCCCEEEHHHHCCCCCCCCCCCCCEEECCEEEEEECCCEEEEEE
RNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVVSPARTLYLDADIKDVALS
CCCHHHHHHHHHHHHHHHCCEEEEEEECCHHEEECCCEEEEECCCEEEEEECCCEEEEEC
DDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFIKSNIYNNYLYIFEKTGYLIKMNLNLD
CCCEEEEECCCCEEEECCCHHHHHHCCEEEEEEEECCCCCCEEEEEECCCEEEEEEECCC
NAQVFQLSEAVDKISFMGNGKFYYGDKILDLL
CCEEEEHHHHHHHEEEEECCEEEECCEEEECC
>Mature Secondary Structure
MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVDWNLVSAKLSNNTAIL
CCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEECCCEEEE
KNNISIDKFKLPKNYMLLTYQDGEYFTADNNGNLKIFDNSYNEIYSFQFDSSVVGVASNG
ECCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEEECCEEEEEECCC
DDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANPIFLDNIIVYPTLDGKILILS
CCEEEEEECCEEEEEECCCCEEEHHHHCCCCCCCCCCCCCEEECCEEEEEECCCEEEEEE
RNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVVSPARTLYLDADIKDVALS
CCCHHHHHHHHHHHHHHHCCEEEEEEECCHHEEECCCEEEEECCCEEEEEECCCEEEEEC
DDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFIKSNIYNNYLYIFEKTGYLIKMNLNLD
CCCEEEEECCCCEEEECCCHHHHHHCCEEEEEEEECCCCCCEEEEEECCCEEEEEEECCC
NAQVFQLSEAVDKISFMGNGKFYYGDKILDLL
CCEEEEHHHHHHHEEEEECCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]