| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is yvyE [H]
Identifier: 153952063
GI number: 153952063
Start: 1352707
End: 1353291
Strand: Direct
Name: yvyE [H]
Synonym: JJD26997_1527
Alternate gene names: 153952063
Gene position: 1352707-1353291 (Clockwise)
Preceding gene: 153952454
Following gene: 153952015
Centisome position: 73.31
GC content: 27.01
Gene sequence:
>585_bases ATGCAAACTATTGATCAAATTTTTCAAACACAAATTGATATTAAAAAATCTACTTTCTTATCTTTTCTTTGCCCTTTTAA AGATTTTAAATTTTTAATAGAAACATTAAAAAAAGAGCATCCAAAAGCCGTTCATTTTGTCTATGCTTATCGTGTTTTAA ATGATTTTAATCAAATTGTAGAAGATAAAAGCGATGATGGAGAGCCTAAAGGAACTTCTGGAATGCCAACTTTAAATGTT CTAAGAGGCTATGATCTTATCAATGCGGCTTTAATTACTGTAAGATATTTTGGTGGCATAAAACTTGGCACAGGGGGACT TGTAAGAGCTTATAGTGATGCGGCAAATGCCGTGATCAATAATTCTTCTTTGCTTTCATTCGAATTGAAAAAAAACATAA CTATTGTTATTGATTTAAAAAATTTAAATCGTTTTGAACATTTTTTAAAAACTTATTCTTTTAATTTCACAAAAGATTTT AAGGATTGCAAAGCTATATTACATATCAAATTAAATCAAAAAGAGGAGCAAGAATTTGAAATTTTTTGTAAAAATTTTGC ACCTTTTGAAATAGAGAAATTATAA
Upstream 100 bases:
>100_bases TAAACTTAAAATATCAATGCAAATCATACAAATATCTTAAAATTAACATCAAATTGATTTTAGTTTTTATAAGTATAATT TTAAACAAAAAAAGGCAAAA
Downstream 100 bases:
>100_bases ATTCTTGCAAATAAACACAAAAGCTCCAAAATGGAGCTTTTGATTAAATTGCGTTGAACAAATCATTTAATAAAGTATTA TTCTTACTTTATTCATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIVIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNQKEEQEFEIFCKNFAPFEIEKL
Sequences:
>Translated_194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIVIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNQKEEQEFEIFCKNFAPFEIEKL >Mature_194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIVIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNQKEEQEFEIFCKNFAPFEIEKL
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22382; Mature: 22382
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIV CCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVIN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHEEC NSSLLSFELKKNITIVIDLKNLNRFEHFLKTYSFNFTKDFKDCKAILHIKLNQKEEQEFE CCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHH IFCKNFAPFEIEKL HHHCCCCCEEEECC >Mature Secondary Structure MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIV CCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVIN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHEEC NSSLLSFELKKNITIVIDLKNLNRFEHFLKTYSFNFTKDFKDCKAILHIKLNQKEEQEFE CCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHH IFCKNFAPFEIEKL HHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]