| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is basR [C]
Identifier: 153952004
GI number: 153952004
Start: 1732531
End: 1733418
Strand: Direct
Name: basR [C]
Synonym: JJD26997_1962
Alternate gene names: 153952004
Gene position: 1732531-1733418 (Clockwise)
Preceding gene: 153952415
Following gene: 153951226
Centisome position: 93.9
GC content: 25.11
Gene sequence:
>888_bases ATGAAAGTTTTAATTATTGAAAATGAAATTTATCTAGCGCAAAGCATTAGCATTAAACTAAGTGATGCTGGATATAGCTG TGAAATTATCAACTCGTTTGATGAGTACAATGGTGAAAAATACTATGATATTGTACTGCTTTCTACAAATACTAATAATT TTCTAAAAGCCGTAGGTCAGTTTAAACATAGTATTATTATTTTGCTTATTTCTTATATAAGTACAGATACAGTTTCAAAT CCTTTGAAATTAGGTGCTAGTGATTATATTCAAAAACCCTTTATGATAGAAGAGCTGATTAGAAAAATAAAGCATTATCA GGATTTTAGAAAACTTTCAATCCTTAATAAAGCTTATCAAAACTATATCAAATCAAGATTAGAAACAATCAAAATTCCAG AGTATAATTATAAAAAATTAAAACTTCCATTGATATTAAAATCCAACAAGCAAAGCAGCGCTGATGCTTTTGTTTTTAAT TATGCAAATGAATGTGACATTACTCTTTCTTTTATTGATTTAACATCTACAAATTCAGTTGAAAAAGTTATGAAACTTCC TACAGAAAACAATCTTTTATTTTTAAGTAATTTTCAAGCATTGAAAGCAGCAGAAAAGAAAAAACTCCTAGATTTTATAC AAAACAAAAATGTTATTTTGCATACCAATTCAAATACAGATGATTTAAAAATAAACTGCATTAATTTAAATGATAATGAA AAAAATATCGATAGCAATGAAATTTTAACCATAGATGAGTATGTAAAATATGTTATTATAAATTACCAAAATATATTTCC TGATACTGATCTTTCAAAAAAATTAGGCATTTCGCGTAAATCTTTATGGGAAAAAAGGAAGAAATATGAAATCAGCAAGA AAAAATAA
Upstream 100 bases:
>100_bases TTAAAGCCACAACAACAGAAAAATTGGGTTTTATTGGAAGAAAAGAAGGTATGGCGGTGCTTAGTAGTGTAAATTTAAAA TATTTTGATTGGACAAGATT
Downstream 100 bases:
>100_bases AAACATTATCATAGATCAAAATGAATTTGGCATCTTATCGCTTATTAAAGAAGGTTTATTAGGCACTTGCACTCATTTAA TGAATGAAAAAGAAGTCAAT
Product: DNA-binding response regulator, putative
Products: NA
Alternate protein names: Two-Component Response Regulator; Response Regulator Receiver Domain Protein; Response Regulator Receiver Protein; Cation-Efflux System Membrane Protein; Two Component Transcriptional Regulator Fis Family; CheY-Like Receiver Domain-Containing Protein; Response Regulator Receiver; Two-Component Regulator; Integral Membrane Protein; Two Component Response Regulator; Two-Component Regulator/Response Regulator
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIVLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSN PLKLGASDYIQKPFMIEELIRKIKHYQDFRKLSILNKAYQNYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKKKLLDFIQNKNVILHTNSNTDDLKINCINLNDNE KNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK
Sequences:
>Translated_295_residues MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIVLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSN PLKLGASDYIQKPFMIEELIRKIKHYQDFRKLSILNKAYQNYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKKKLLDFIQNKNVILHTNSNTDDLKINCINLNDNE KNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK >Mature_295_residues MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIVLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSN PLKLGASDYIQKPFMIEELIRKIKHYQDFRKLSILNKAYQNYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKKKLLDFIQNKNVILHTNSNTDDLKINCINLNDNE KNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK
Specific function: Member Of The Two-Component Regulatory System Bass/Basr. Polymyxin Resistance May Be Mediated By An Interaction Between Basr (Pmra) Or A Basr-Regulated Gene Product And Pmrd (By Similarity). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34266; Mature: 34266
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIVLLSTNTNNFLKAVGQ CEEEEEECCEEEEEEEEEEEECCCCEEEEECCHHHCCCCEEEEEEEEEECCCHHHHHHHH FKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRKIKHYQDFRKLSILNKAYQ HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFNYANECDITLSFIDLTSTNSV HHHHHHHHEEECCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECCCCHH EKVMKLPTENNLLFLSNFQALKAAEKKKLLDFIQNKNVILHTNSNTDDLKINCINLNDNE HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCC KNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK CCCCCCCEEEHHHHEEEEEEEEHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIVLLSTNTNNFLKAVGQ CEEEEEECCEEEEEEEEEEEECCCCEEEEECCHHHCCCCEEEEEEEEEECCCHHHHHHHH FKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRKIKHYQDFRKLSILNKAYQ HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFNYANECDITLSFIDLTSTNSV HHHHHHHHEEECCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECCCCHH EKVMKLPTENNLLFLSNFQALKAAEKKKLLDFIQNKNVILHTNSNTDDLKINCINLNDNE HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCC KNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK CCCCCCCEEEHHHHEEEEEEEEHHCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA