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The map label for this gene is 153951941

Identifier: 153951941

GI number: 153951941

Start: 771930

End: 773096

Strand: Direct

Name: 153951941

Synonym: JJD26997_0867

Alternate gene names: NA

Gene position: 771930-773096 (Clockwise)

Preceding gene: 153951975

Following gene: 153951768

Centisome position: 41.84

GC content: 28.88

Gene sequence:

>1167_bases
ATGAAATATGATATTGAAAGACTTAATAATATTCCTATTATGGATGTGTTGGAGTCTTTAGGTGCAATTAGCGGCAAAAA
TAAAAGGATTATACACTGCTTTAATATAACAGCACACAAAAACAACGATCATAATGCTTCTTTAGGCATTTATGAAAGTA
CTAATACTTGTCATTGCTTTGCATGCGGAATAGGTGGAAATCCTGTCAATGTTGTAAAAACCATGTTTAATGGTAATTTT
AAAGAAGCTTGTGAATATTTGCATTCACAATTTAATATTCCATTCTTGGATGGAATACAAGCAACCTATAAAAAGGTGTT
TGAAAGACCAAAACCTAAAGCGAAGGATTATGTGTTTTTTGATCCTAATAAAAAATATGTAGAAGTTGAAAAATTAGTTC
CTTTTGTGCAAAATTATTCAACATTAACAAAAGCACAAAAATTAAAGTTAGTTTACACAACTATCTATCGCTTTTCTTTA
TCAACTGAACAAAAAGCTAAAAACCTTTATTATCTAAAAAGGGGTATTAAGGATTTGAGTTTAGTTGAAAAAATTGGTTT
TTTAAATTTTAACAACATAAAAAAACTTGAAAATCTTTTAAAAGAATATTTTCCTATAGAAGATTTAATTGAGTTTAAAA
TTTTCAGTGAAGAGAAACAAGCTTGGAAATATGCTTTTAATGTAGCTCTTGTTCCAAATTTTGATCTTTACTCAAATAGG
GTTGTGGGTTTTTCTCTTCGTGTTATTGATAGTACTTATAATGGAGCTAAAGAAGTAAATATTTCCTGCGGTAATATTGT
TTTTGCAATGCCTTTTGGTTTAGAAAATAAATCATTAAAAGAATGCGAAAAAATAGTAATCACCGAAGGACACATTGATT
GCTTATCAGCAAGAAATTACTACAAACAAGATTCAAAAACCTTGTTTGTTAGCTTTGCAGGAACTTTCAGTTTTAGAGAA
GAAATACTCACTGTGTTTAAAGGCAAAAGAGTCATGCTTTGTTTTGATAAAGATGAAGCAGGGATAAATGGAGAAAAAAG
TTTAAGCGAGAAATTAAGCCTTTTAAATATCAAAAACTATAGCCTTACTTGGGATGTAGCAGATGGAAAAGATTTAAATG
ACTTGCTTTTGGCAGATAAAATGAATAGCATTAAATTAAAAGCTTAG

Upstream 100 bases:

>100_bases
AAATACAGATAATTTTTGTGGATGTGAAGAAGTTTTTTAGAACTTTATAAACCTCGCATTAGTTTTTTCAAGACTAATGC
TAACAAATAAGGAGAATTTA

Downstream 100 bases:

>100_bases
AGGAGTACAAAATGGCATTAAGCTACGAATTATGTTGTAAATTATTTGATAAAAATTTTGAAAATCTTAACTACACAAAA
GAAGAACTTTTCTTTATTAG

Product: putative DNA primase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKYDIERLNNIPIMDVLESLGAISGKNKRIIHCFNITAHKNNDHNASLGIYESTNTCHCFACGIGGNPVNVVKTMFNGNF
KEACEYLHSQFNIPFLDGIQATYKKVFERPKPKAKDYVFFDPNKKYVEVEKLVPFVQNYSTLTKAQKLKLVYTTIYRFSL
STEQKAKNLYYLKRGIKDLSLVEKIGFLNFNNIKKLENLLKEYFPIEDLIEFKIFSEEKQAWKYAFNVALVPNFDLYSNR
VVGFSLRVIDSTYNGAKEVNISCGNIVFAMPFGLENKSLKECEKIVITEGHIDCLSARNYYKQDSKTLFVSFAGTFSFRE
EILTVFKGKRVMLCFDKDEAGINGEKSLSEKLSLLNIKNYSLTWDVADGKDLNDLLLADKMNSIKLKA

Sequences:

>Translated_388_residues
MKYDIERLNNIPIMDVLESLGAISGKNKRIIHCFNITAHKNNDHNASLGIYESTNTCHCFACGIGGNPVNVVKTMFNGNF
KEACEYLHSQFNIPFLDGIQATYKKVFERPKPKAKDYVFFDPNKKYVEVEKLVPFVQNYSTLTKAQKLKLVYTTIYRFSL
STEQKAKNLYYLKRGIKDLSLVEKIGFLNFNNIKKLENLLKEYFPIEDLIEFKIFSEEKQAWKYAFNVALVPNFDLYSNR
VVGFSLRVIDSTYNGAKEVNISCGNIVFAMPFGLENKSLKECEKIVITEGHIDCLSARNYYKQDSKTLFVSFAGTFSFRE
EILTVFKGKRVMLCFDKDEAGINGEKSLSEKLSLLNIKNYSLTWDVADGKDLNDLLLADKMNSIKLKA
>Mature_388_residues
MKYDIERLNNIPIMDVLESLGAISGKNKRIIHCFNITAHKNNDHNASLGIYESTNTCHCFACGIGGNPVNVVKTMFNGNF
KEACEYLHSQFNIPFLDGIQATYKKVFERPKPKAKDYVFFDPNKKYVEVEKLVPFVQNYSTLTKAQKLKLVYTTIYRFSL
STEQKAKNLYYLKRGIKDLSLVEKIGFLNFNNIKKLENLLKEYFPIEDLIEFKIFSEEKQAWKYAFNVALVPNFDLYSNR
VVGFSLRVIDSTYNGAKEVNISCGNIVFAMPFGLENKSLKECEKIVITEGHIDCLSARNYYKQDSKTLFVSFAGTFSFRE
EILTVFKGKRVMLCFDKDEAGINGEKSLSEKLSLLNIKNYSLTWDVADGKDLNDLLLADKMNSIKLKA

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44450; Mature: 44450

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYDIERLNNIPIMDVLESLGAISGKNKRIIHCFNITAHKNNDHNASLGIYESTNTCHCF
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCEEEE
ACGIGGNPVNVVKTMFNGNFKEACEYLHSQFNIPFLDGIQATYKKVFERPKPKAKDYVFF
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
DPNKKYVEVEKLVPFVQNYSTLTKAQKLKLVYTTIYRFSLSTEQKAKNLYYLKRGIKDLS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHCCHHHH
LVEKIGFLNFNNIKKLENLLKEYFPIEDLIEFKIFSEEKQAWKYAFNVALVPNFDLYSNR
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHEECCHHHHEEEEEEEEEECCCCHHCCE
VVGFSLRVIDSTYNGAKEVNISCGNIVFAMPFGLENKSLKECEKIVITEGHIDCLSARNY
EEEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCHHHHHEEEEECCCHHHHHHHHH
YKQDSKTLFVSFAGTFSFREEILTVFKGKRVMLCFDKDEAGINGEKSLSEKLSLLNIKNY
HCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECC
SLTWDVADGKDLNDLLLADKMNSIKLKA
EEEEECCCCCCCHHHHHHCCCCCEEECC
>Mature Secondary Structure
MKYDIERLNNIPIMDVLESLGAISGKNKRIIHCFNITAHKNNDHNASLGIYESTNTCHCF
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCCCEEEE
ACGIGGNPVNVVKTMFNGNFKEACEYLHSQFNIPFLDGIQATYKKVFERPKPKAKDYVFF
EECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
DPNKKYVEVEKLVPFVQNYSTLTKAQKLKLVYTTIYRFSLSTEQKAKNLYYLKRGIKDLS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHCCHHHH
LVEKIGFLNFNNIKKLENLLKEYFPIEDLIEFKIFSEEKQAWKYAFNVALVPNFDLYSNR
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHEECCHHHHEEEEEEEEEECCCCHHCCE
VVGFSLRVIDSTYNGAKEVNISCGNIVFAMPFGLENKSLKECEKIVITEGHIDCLSARNY
EEEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCCHHHHHEEEEECCCHHHHHHHHH
YKQDSKTLFVSFAGTFSFREEILTVFKGKRVMLCFDKDEAGINGEKSLSEKLSLLNIKNY
HCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHEEEEECC
SLTWDVADGKDLNDLLLADKMNSIKLKA
EEEEECCCCCCCHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA