Click here to switch to the map view.

The map label for this gene is flaA [H]

Identifier: 153951910

GI number: 153951910

Start: 326255

End: 327976

Strand: Direct

Name: flaA [H]

Synonym: JJD26997_0372

Alternate gene names: 153951910

Gene position: 326255-327976 (Clockwise)

Preceding gene: 153951592

Following gene: 153951966

Centisome position: 17.68

GC content: 39.72

Gene sequence:

>1722_bases
ATGGGATTTCGTATTAACACCAATGTTGGAGCATTAAATGCTAAAGCAAATGCTGATTTAAACAGCAAAAATTTGGATGC
TTCTTTAAGCAGACTCAGTTCAGGTCTTAGAATCAATTCCGCAGCAGATGATGCCTCAGGGATGGCGATAGCAGATAGTT
TAAGATCTCAAGCCAATACTTTAGGTCAAGCTATCAACAATGGTAATGATGCTTTAGGTATCTTACAAACTGCAGATAAG
GCTATGGATGAGCAACTTAAGATCTTAGATACGATTAAGACTAAGGCAACTCAAGCCGCTCAAGATGGACAAAGCTTAAA
AACAAGAACCATGCTTCAAGCCGATATCAACCGCTTGATGGAAGAACTTGACAATATCGCCAATACCACTTCATTTAACG
GTAAACAACTTTTAAGTGGAAATTTCATCAATCAAGAATTTCAAATCGGTGCAAGCTCAAACCAAACCGTAAAGGCTACT
ATAGGAGCGACTCAATCTTCTAAAATCGGTTTAACACGCTTTGAAACGGGGGGAAGGATTTCATCTGGGGGCAAAGTGCA
ATTTACTTTGAAAAACTATAACGGTATAGATGATTTTAAATTTCAAGAAGTTACGATTTCAACTTCAGTTGGAACGGGTC
TTGGGGCTTTGGCCGATGAGATCAATAAAAATGCCGATAAAACCGGTGTTAGGGCTACTTTCAAAGTAGAAACTCGAGGT
GTGGCTGCGGTTAAAGGAGGATCTACAGGAGATGATTTTGCCATCAATGGGGTAAAAATCGGCAAAGTTGAATTTAAAGA
CAGCGATGGTAATGGTGCTTTAGTTTCTGCGATCAACTCGGTTAAAGACACGACAGGAGTAGAAGCTTCTATAGATGAAA
ATGGCAAGCTTTTGCTCACTTCAAGAGAGGGAAGAGGCATTAAAATCGAAGGAAACATCGGTGGTGGGGCTTTTATCAAT
AAAGACATGAAAGAAAACTATGGTCGTTTGTCTTTAGTAAAAAATGATGGTAAAGATATTTTTATCAGTGGTTCTGGACT
TTCTTTTGCAGGCTTTGGAGCGAGTAATTTTATCTCTCAAGCTTCTGTGTCTTTAAGAGAATCAAAAGGGCAAATCGATG
CCAATGTCGCGGATGCTATGGGCTTTGGTTCTGTAAATAAAGGAATGATACTAGGTGCTTCTTCTATTTCTGCTTATATG
AGTAGTGCAGGAAGTGGATTTTCTGAGGGTTCGGGTTTTTCTATGGGTAAGGGTAGTTATTCTACTACACTAAGTTCTGC
TTGTGTCTTAATTTCGGCTACTTCAGCTATTTCTCAAGTTTATGATGTATCTGCAGGTTCAGGTTTTTCAAGTGGTTCTA
ACTTGTCTCAATTTGCTAAGATGAAAACAAGCGCAGGAGCTTTTAATGTGAAAGCTGAAACCGCAGGGGTAACCACGCTT
AAGGGAGCTATGGCGGTGATGGATATAGCAGAAACAGCTATAGCAAATCTTGATCAAATCAGAGCCGACATTGGTTCGGT
GCAAAATCAAGTTACATCCACTATCAACAACATCACTGTAACCCAAGTCAATGTCAAATCAGCAGAATCACAAATCAGAG
ATGTGGACTTTGCAAGTGAGAGTGCGAACTACTCTAAAGCAAATATTTTAGCTCAGAGTGGCTCTTATGCCATGGCACAG
GCTAATGCCGTGCAGCAAAATGTTTTAAGATTGCTTCAATGA

Upstream 100 bases:

>100_bases
ATATGAATCTTTGCTAAAAGTATAAAATATTTTTTTGATTTCACGATATAGCGTTTAACAAGTTCATGGATGAGCTTGAA
ATTTTTTAAAAGGATTTAAA

Downstream 100 bases:

>100_bases
TTTCTTAGATGCTTTTATGCATCTAAGCTTTTAAAGTGCTTTTTTCTTTTCTAAAAAATCTTGCAAAGCTAAGATAGCGA
TTTTAAGTCTTTTATCTTGA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MGFRINTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAINNGNDALGILQTADK
AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKAT
IGATQSSKIGLTRFETGGRISSGGKVQFTLKNYNGIDDFKFQEVTISTSVGTGLGALADEINKNADKTGVRATFKVETRG
VAAVKGGSTGDDFAINGVKIGKVEFKDSDGNGALVSAINSVKDTTGVEASIDENGKLLLTSREGRGIKIEGNIGGGAFIN
KDMKENYGRLSLVKNDGKDIFISGSGLSFAGFGASNFISQASVSLRESKGQIDANVADAMGFGSVNKGMILGASSISAYM
SSAGSGFSEGSGFSMGKGSYSTTLSSACVLISATSAISQVYDVSAGSGFSSGSNLSQFAKMKTSAGAFNVKAETAGVTTL
KGAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKANILAQSGSYAMAQ
ANAVQQNVLRLLQ

Sequences:

>Translated_573_residues
MGFRINTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAINNGNDALGILQTADK
AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKAT
IGATQSSKIGLTRFETGGRISSGGKVQFTLKNYNGIDDFKFQEVTISTSVGTGLGALADEINKNADKTGVRATFKVETRG
VAAVKGGSTGDDFAINGVKIGKVEFKDSDGNGALVSAINSVKDTTGVEASIDENGKLLLTSREGRGIKIEGNIGGGAFIN
KDMKENYGRLSLVKNDGKDIFISGSGLSFAGFGASNFISQASVSLRESKGQIDANVADAMGFGSVNKGMILGASSISAYM
SSAGSGFSEGSGFSMGKGSYSTTLSSACVLISATSAISQVYDVSAGSGFSSGSNLSQFAKMKTSAGAFNVKAETAGVTTL
KGAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKANILAQSGSYAMAQ
ANAVQQNVLRLLQ
>Mature_572_residues
GFRINTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAINNGNDALGILQTADKA
MDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATI
GATQSSKIGLTRFETGGRISSGGKVQFTLKNYNGIDDFKFQEVTISTSVGTGLGALADEINKNADKTGVRATFKVETRGV
AAVKGGSTGDDFAINGVKIGKVEFKDSDGNGALVSAINSVKDTTGVEASIDENGKLLLTSREGRGIKIEGNIGGGAFINK
DMKENYGRLSLVKNDGKDIFISGSGLSFAGFGASNFISQASVSLRESKGQIDANVADAMGFGSVNKGMILGASSISAYMS
SAGSGFSEGSGFSMGKGSYSTTLSSACVLISATSAISQVYDVSAGSGFSSGSNLSQFAKMKTSAGAFNVKAETAGVTTLK
GAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVDFASESANYSKANILAQSGSYAMAQA
NAVQQNVLRLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=215, Percent_Identity=32.093023255814, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 59330; Mature: 59199

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRINTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANT
CCEEEECCCCEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH
LGQAINNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLM
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRI
HHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCEE
SSGGKVQFTLKNYNGIDDFKFQEVTISTSVGTGLGALADEINKNADKTGVRATFKVETRG
CCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEECCC
VAAVKGGSTGDDFAINGVKIGKVEFKDSDGNGALVSAINSVKDTTGVEASIDENGKLLLT
EEEEECCCCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEE
SREGRGIKIEGNIGGGAFINKDMKENYGRLSLVKNDGKDIFISGSGLSFAGFGASNFISQ
ECCCCEEEEEECCCCCCEECCHHHCCCCEEEEEECCCCEEEEECCCCEEECCCHHHHHHH
ASVSLRESKGQIDANVADAMGFGSVNKGMILGASSISAYMSSAGSGFSEGSGFSMGKGSY
HHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
STTLSSACVLISATSAISQVYDVSAGSGFSSGSNLSQFAKMKTSAGAFNVKAETAGVTTL
HHHHHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHH
KGAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVDFASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCC
SANYSKANILAQSGSYAMAQANAVQQNVLRLLQ
CCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GFRINTNVGALNAKANADLNSKNLDASLSRLSSGLRINSAADDASGMAIADSLRSQANT
CEEEECCCCEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH
LGQAINNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLM
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRI
HHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCEE
SSGGKVQFTLKNYNGIDDFKFQEVTISTSVGTGLGALADEINKNADKTGVRATFKVETRG
CCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEECCC
VAAVKGGSTGDDFAINGVKIGKVEFKDSDGNGALVSAINSVKDTTGVEASIDENGKLLLT
EEEEECCCCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEE
SREGRGIKIEGNIGGGAFINKDMKENYGRLSLVKNDGKDIFISGSGLSFAGFGASNFISQ
ECCCCEEEEEECCCCCCEECCHHHCCCCEEEEEECCCCEEEEECCCCEEECCCHHHHHHH
ASVSLRESKGQIDANVADAMGFGSVNKGMILGASSISAYMSSAGSGFSEGSGFSMGKGSY
HHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
STTLSSACVLISATSAISQVYDVSAGSGFSSGSNLSQFAKMKTSAGAFNVKAETAGVTTL
HHHHHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHH
KGAMAVMDIAETAIANLDQIRADIGSVQNQVTSTINNITVTQVNVKSAESQIRDVDFASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCC
SANYSKANILAQSGSYAMAQANAVQQNVLRLLQ
CCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA