| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951846
Identifier: 153951846
GI number: 153951846
Start: 282768
End: 283982
Strand: Direct
Name: 153951846
Synonym: JJD26997_0320
Alternate gene names: NA
Gene position: 282768-283982 (Clockwise)
Preceding gene: 153952533
Following gene: 153951141
Centisome position: 15.33
GC content: 27.9
Gene sequence:
>1215_bases ATGATACCCCATTTTATAGCAAGTTTTGAAGTGGCAAATTACACAAGAAAAAGCCTAAGGCAGAGAAAAGGCTATTTGAA ACTATCCAATACCATAGCTTACGGCGGACTTAGCGTTGATGCTTTAGCATTATATATACAACTAGCAAAGCTTAGTGAAA AAACGATTGTAAGCGAAATTTACTTAAGAGAGTTTATAAAAGTTAAAAATAATCAAAGAATGAGTTTAAACAGACTAAGA ATGGCTAAAAAAGAATTGATTGAACTGAGACTTTTAGAAATTAAAAAGCTTAGAAAGGGCTCTTTAAATTTTTATGAGTG GATTTTAAAAGATGAAAATTATCAAATTAAAAAGCATTTTAATCAAGCTTTAACTTTGCTTAAAAGCAGTGATGAAAAGC TAAGCAAAACTCTTAAAAATAACGCGTCATCAATCGACAGAAAATTAACTCCTGAAAACGAAAAAAATCAAAATTCCCTA TATATAGAAACACGCACGCACGCACGCGATAATAAATTTATAAATAATATAAATAATATAAATAATATAAATAATATAAA TAATATAAATAATATAAATAATATAAATAATAAAGAATTTATAAAAAAAGAGAATTTAGAAAATTTAAAAAATAAAGAAA CAAAAGAAAAAGAAAATTGCGTTTTTGACAAAACGCCATCTTTTATCGTTGATTTTAACAAACTTGACAAGGAGGATTTA GAACTTATGGCTAATAAACTAAACAACAAACAAGCCCTAAAGGCAAAGGCTATTAAAGCATATAAAGAAAGAAATATCAC TAATTTTAGCTTAGAAGATTGGATTTTATGGGTTGATTATAAGCTTGAAAAAGAAAAAGCTCCTACTATGGCGACTTTTA ATCATAATCTTAACCAGCTTGTATCTTTTGGAATGAGTGCTAAAGAGAGTATTAGCAATAGCATTAGTAGCGGGTGGAAA GGATTATTTGAAGTCAAAGCACAAAGTGGATTTAAAAAATATGATAAAAACATTAAATTTGATTTTGAAAGAGATGAAAA GAAAATGGCAGAGTTTGAAGATATGCTAGATAGAGTTTATGGCAAAAGTGATGGAAAAAGAGAAATAGACCTTGATAAAA TGGTTGGTGGAAATGATGATAGTTTGAGTTGGGCGGATATGTTTAATTACAAAGACAAACACACTCATTTGATTGATGTA GAAGTTTTAGATTAA
Upstream 100 bases:
>100_bases AAAACGGATTAAGGAATGAAATGCTTGAAAGATTGATTGAGATTATAGGATTATTTATTTTTACTTTGATGTATTTAAAT TATAACATAAAGGAGCGTAA
Downstream 100 bases:
>100_bases GGAGAATAAAAATGACAAAACTAGAACTGATTGAAGCGTTATTTGGTTTAAGTAAAACACAGGCTAATATAGCAGAAAAA AGATATTTTAATAATTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MIPHFIASFEVANYTRKSLRQRKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIVSEIYLREFIKVKNNQRMSLNRLR MAKKELIELRLLEIKKLRKGSLNFYEWILKDENYQIKKHFNQALTLLKSSDEKLSKTLKNNASSIDRKLTPENEKNQNSL YIETRTHARDNKFINNINNINNINNINNINNINNINNKEFIKKENLENLKNKETKEKENCVFDKTPSFIVDFNKLDKEDL ELMANKLNNKQALKAKAIKAYKERNITNFSLEDWILWVDYKLEKEKAPTMATFNHNLNQLVSFGMSAKESISNSISSGWK GLFEVKAQSGFKKYDKNIKFDFERDEKKMAEFEDMLDRVYGKSDGKREIDLDKMVGGNDDSLSWADMFNYKDKHTHLIDV EVLD
Sequences:
>Translated_404_residues MIPHFIASFEVANYTRKSLRQRKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIVSEIYLREFIKVKNNQRMSLNRLR MAKKELIELRLLEIKKLRKGSLNFYEWILKDENYQIKKHFNQALTLLKSSDEKLSKTLKNNASSIDRKLTPENEKNQNSL YIETRTHARDNKFINNINNINNINNINNINNINNINNKEFIKKENLENLKNKETKEKENCVFDKTPSFIVDFNKLDKEDL ELMANKLNNKQALKAKAIKAYKERNITNFSLEDWILWVDYKLEKEKAPTMATFNHNLNQLVSFGMSAKESISNSISSGWK GLFEVKAQSGFKKYDKNIKFDFERDEKKMAEFEDMLDRVYGKSDGKREIDLDKMVGGNDDSLSWADMFNYKDKHTHLIDV EVLD >Mature_404_residues MIPHFIASFEVANYTRKSLRQRKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIVSEIYLREFIKVKNNQRMSLNRLR MAKKELIELRLLEIKKLRKGSLNFYEWILKDENYQIKKHFNQALTLLKSSDEKLSKTLKNNASSIDRKLTPENEKNQNSL YIETRTHARDNKFINNINNINNINNINNINNINNINNKEFIKKENLENLKNKETKEKENCVFDKTPSFIVDFNKLDKEDL ELMANKLNNKQALKAKAIKAYKERNITNFSLEDWILWVDYKLEKEKAPTMATFNHNLNQLVSFGMSAKESISNSISSGWK GLFEVKAQSGFKKYDKNIKFDFERDEKKMAEFEDMLDRVYGKSDGKREIDLDKMVGGNDDSLSWADMFNYKDKHTHLIDV EVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47303; Mature: 47303
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPHFIASFEVANYTRKSLRQRKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIVSEI CCCCHHHHHHHHHHHHHHHHHHCCCEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHH YLREFIKVKNNQRMSLNRLRMAKKELIELRLLEIKKLRKGSLNFYEWILKDENYQIKKHF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH NQALTLLKSSDEKLSKTLKNNASSIDRKLTPENEKNQNSLYIETRTHARDNKFINNINNI HHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCC NNINNINNINNINNINNKEFIKKENLENLKNKETKEKENCVFDKTPSFIVDFNKLDKEDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCHHHH ELMANKLNNKQALKAKAIKAYKERNITNFSLEDWILWVDYKLEKEKAPTMATFNHNLNQL HHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHEEEEEEEEECCCCCCCEEECCCCHHHH VSFGMSAKESISNSISSGWKGLFEVKAQSGFKKYDKNIKFDFERDEKKMAEFEDMLDRVY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH GKSDGKREIDLDKMVGGNDDSLSWADMFNYKDKHTHLIDVEVLD CCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEC >Mature Secondary Structure MIPHFIASFEVANYTRKSLRQRKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIVSEI CCCCHHHHHHHHHHHHHHHHHHCCCEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHH YLREFIKVKNNQRMSLNRLRMAKKELIELRLLEIKKLRKGSLNFYEWILKDENYQIKKHF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH NQALTLLKSSDEKLSKTLKNNASSIDRKLTPENEKNQNSLYIETRTHARDNKFINNINNI HHHHHHHHCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCC NNINNINNINNINNINNKEFIKKENLENLKNKETKEKENCVFDKTPSFIVDFNKLDKEDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCCCHHHH ELMANKLNNKQALKAKAIKAYKERNITNFSLEDWILWVDYKLEKEKAPTMATFNHNLNQL HHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHEEEEEEEEECCCCCCCEEECCCCHHHH VSFGMSAKESISNSISSGWKGLFEVKAQSGFKKYDKNIKFDFERDEKKMAEFEDMLDRVY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH GKSDGKREIDLDKMVGGNDDSLSWADMFNYKDKHTHLIDVEVLD CCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA