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The map label for this gene is traC [H]

Identifier: 153951831

GI number: 153951831

Start: 833095

End: 835167

Strand: Direct

Name: traC [H]

Synonym: JJD26997_0936

Alternate gene names: 153951831

Gene position: 833095-835167 (Clockwise)

Preceding gene: 153951146

Following gene: 153951366

Centisome position: 45.15

GC content: 31.07

Gene sequence:

>2073_bases
ATGACTGCAAGATTAAAAAATTACTATCTTTTAGTTTCTATAAAATCTCATACCGAAGAAGATGTAATTTCTTATAAGCA
TATTTTAAAAAATATTCTTACTTCAAATAATTTTTCACCTGTTGTAGCTGAGCCTGAGATTTTAAAACCTATGCTTTACG
AGCTTTTTAATGGTAATCATGATATTAACAATATTCCAAGTTATGATAGGACTTGTTATCTTAATAGACAAGTTATTATG
CCTACAACAGAAATTTTAATTCAAGATGATGAGTTAAAAATAGACGGTAGAAGTTTTATTAGCTTAACTCCACAAACTTT
TCCACAAGAAGCACATATTGCTGATTTTGGGGAAAAATTAGGGGATTATATAAGCAGGGCTTTAGACAATAATCAATTCA
AAGATACTTTTTTAATTACTGCTTCTATTTGTGCTTTATCTAAGAAAAAAACTACACGAGTAAGAAATAATCATTCTATG
CTTTTGACACAAAAATGGAGTGAAGCTATTTTTAGACAGTTTGCAGCAGCTAGAAAAGAAAGCGTTTCCATACTTGAAAG
AATAGACAATCAAAAAGAAAAGCTTTATGCTTTTGATTTGAATGTTATAGTTAGTGGTGATACTTATGATGAAGCCTCAT
TAAATGCAAGCACTATTATTTCTTATTGGAATAAAGGCGGTGGTAAAGCTATTGTACTTGATGAAGCTTTAGGAATTCAT
CAACTTAATCTTATTGCTTCTTTGCCTATGGGGATTAATAAAGAATATATGTTTGATATTACTGCAAAATATCGCTCTAT
GTTTCCTGATCAAATTTCACAATTCATTCCTTTAGAAGCAGATTATAAACTCAATATTCCAAATTTGATTTTATTCTCAA
GAAGAGCACAAATCGCGTTTGTTTCAAGTTCAAACTATAATGCTTATTTGGTTGCTACTTCAGGCGCAGGAAAATCAGTA
TTTCTGAATATGCTTGCTTTTAGTTCTTATGCTAGAGGTGATAGAATTTTCATTATCGATCAAGATAATTCTTTTATCAA
GCTTTGCGAAGCAGTAGGAGGACAATATCTTGCGCTTGATCCTTCAAAACCTATCAGTTTTAATCCTTTTAGCGGCTTAA
AAAATAATGATAGAGATTCTTTCATGGAGGATTTGGAGTATCTATCAAATTTGATTTACATGTTGGGAAGTTCTAAAAAT
CAAGATAGAGCCTTAGAAGATGAAAGACTTATCAAGGCTAAAACACAAGCAATTATGGAAGAGCTTTTTTTATCCAAAGG
CAATACTATGGAAGTTACAGATATTAGAGATGAACTTGCTAAGATAGATGATCAACGCTTTAGAGATTTTGCAGATCAAT
TACGCCCTTTTTGCAAAGAAGGAATTTACGGTAAATATTTTAATGGTCCTTGCGAGTTTAATATAGAAAAAGAATTTATT
GTAACTGAGTTTAAAGGGCTTGAAGGGTATGATGATTTAAAAGATCCACTTATCATGCTTTTAATCTATCATATTAATCA
GCTTATGTATATGAGTTCAGATAGAAAATCAAGAATTCAAATCATCATTGATGAGGCACACCGCTTCTTAGGAAAAAATC
CAAAAATGGATGATTTCATCGAACAAGCTTATCGTCGTGCTAGAAAATATGGTGCTTCTGCAATTATTGCAACTCAAGGT
TTTGATGATATTTATAATGCTAAAGATGGGGGATTAAGTCGCGCAGGAACGGTTATTATTAATAATTCAGCCTATAAGAT
TTTTATGAAGCAAACCGAAACTTCTGTTAATATGCTAATCAAATCAGAAGTGTTTTCTCTAAGTGAAACCGATAAAGAAA
TTTTGCGCTCTATTATGACTATAAAAGGGGAGTATTCAGAACTTTTTTTAATGACACCTGATGATGTTAAATTGCCTTAT
CGTTTGGTTATGGATAACTATTTTTATTATCTTACCACTACCGATGCAACAGATAAGGCTAAAATCAAAGAATTAACTGA
TCAAGGAATATCTTTAGGAGAAGCCATTGAATTACTTGCTAACACTAAGACAAAAAGCAATGAAACTAAGTAA

Upstream 100 bases:

>100_bases
TTAGACAAGCAAGATGAAGATGAACTTATTCGTGGATTGCTTAAGAATTCACCTGGGAGAGTTTTATTATTCCAAAACCA
AAGAAGGCATTTCAAATTCT

Downstream 100 bases:

>100_bases
AGAACAAATTAGAACGCTTATCAATAAAACTTTGTTTGTTCTAATTGCTTTTATTATTGGAAATATAGTTGTTTCAGCTC
TATCTCAATTTTATGGAATA

Product: putative pillus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 689

Protein sequence:

>690_residues
MTARLKNYYLLVSIKSHTEEDVISYKHILKNILTSNNFSPVVAEPEILKPMLYELFNGNHDINNIPSYDRTCYLNRQVIM
PTTEILIQDDELKIDGRSFISLTPQTFPQEAHIADFGEKLGDYISRALDNNQFKDTFLITASICALSKKKTTRVRNNHSM
LLTQKWSEAIFRQFAAARKESVSILERIDNQKEKLYAFDLNVIVSGDTYDEASLNASTIISYWNKGGGKAIVLDEALGIH
QLNLIASLPMGINKEYMFDITAKYRSMFPDQISQFIPLEADYKLNIPNLILFSRRAQIAFVSSSNYNAYLVATSGAGKSV
FLNMLAFSSYARGDRIFIIDQDNSFIKLCEAVGGQYLALDPSKPISFNPFSGLKNNDRDSFMEDLEYLSNLIYMLGSSKN
QDRALEDERLIKAKTQAIMEELFLSKGNTMEVTDIRDELAKIDDQRFRDFADQLRPFCKEGIYGKYFNGPCEFNIEKEFI
VTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSSDRKSRIQIIIDEAHRFLGKNPKMDDFIEQAYRRARKYGASAIIATQG
FDDIYNAKDGGLSRAGTVIINNSAYKIFMKQTETSVNMLIKSEVFSLSETDKEILRSIMTIKGEYSELFLMTPDDVKLPY
RLVMDNYFYYLTTTDATDKAKIKELTDQGISLGEAIELLANTKTKSNETK

Sequences:

>Translated_690_residues
MTARLKNYYLLVSIKSHTEEDVISYKHILKNILTSNNFSPVVAEPEILKPMLYELFNGNHDINNIPSYDRTCYLNRQVIM
PTTEILIQDDELKIDGRSFISLTPQTFPQEAHIADFGEKLGDYISRALDNNQFKDTFLITASICALSKKKTTRVRNNHSM
LLTQKWSEAIFRQFAAARKESVSILERIDNQKEKLYAFDLNVIVSGDTYDEASLNASTIISYWNKGGGKAIVLDEALGIH
QLNLIASLPMGINKEYMFDITAKYRSMFPDQISQFIPLEADYKLNIPNLILFSRRAQIAFVSSSNYNAYLVATSGAGKSV
FLNMLAFSSYARGDRIFIIDQDNSFIKLCEAVGGQYLALDPSKPISFNPFSGLKNNDRDSFMEDLEYLSNLIYMLGSSKN
QDRALEDERLIKAKTQAIMEELFLSKGNTMEVTDIRDELAKIDDQRFRDFADQLRPFCKEGIYGKYFNGPCEFNIEKEFI
VTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSSDRKSRIQIIIDEAHRFLGKNPKMDDFIEQAYRRARKYGASAIIATQG
FDDIYNAKDGGLSRAGTVIINNSAYKIFMKQTETSVNMLIKSEVFSLSETDKEILRSIMTIKGEYSELFLMTPDDVKLPY
RLVMDNYFYYLTTTDATDKAKIKELTDQGISLGEAIELLANTKTKSNETK
>Mature_689_residues
TARLKNYYLLVSIKSHTEEDVISYKHILKNILTSNNFSPVVAEPEILKPMLYELFNGNHDINNIPSYDRTCYLNRQVIMP
TTEILIQDDELKIDGRSFISLTPQTFPQEAHIADFGEKLGDYISRALDNNQFKDTFLITASICALSKKKTTRVRNNHSML
LTQKWSEAIFRQFAAARKESVSILERIDNQKEKLYAFDLNVIVSGDTYDEASLNASTIISYWNKGGGKAIVLDEALGIHQ
LNLIASLPMGINKEYMFDITAKYRSMFPDQISQFIPLEADYKLNIPNLILFSRRAQIAFVSSSNYNAYLVATSGAGKSVF
LNMLAFSSYARGDRIFIIDQDNSFIKLCEAVGGQYLALDPSKPISFNPFSGLKNNDRDSFMEDLEYLSNLIYMLGSSKNQ
DRALEDERLIKAKTQAIMEELFLSKGNTMEVTDIRDELAKIDDQRFRDFADQLRPFCKEGIYGKYFNGPCEFNIEKEFIV
TEFKGLEGYDDLKDPLIMLLIYHINQLMYMSSDRKSRIQIIIDEAHRFLGKNPKMDDFIEQAYRRARKYGASAIIATQGF
DDIYNAKDGGLSRAGTVIINNSAYKIFMKQTETSVNMLIKSEVFSLSETDKEILRSIMTIKGEYSELFLMTPDDVKLPYR
LVMDNYFYYLTTTDATDKAKIKELTDQGISLGEAIELLANTKTKSNETK

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 78809; Mature: 78678

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARLKNYYLLVSIKSHTEEDVISYKHILKNILTSNNFSPVVAEPEILKPMLYELFNGNH
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
DINNIPSYDRTCYLNRQVIMPTTEILIQDDELKIDGRSFISLTPQTFPQEAHIADFGEKL
CCCCCCCCCCEEEECCEEECCCEEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHH
GDYISRALDNNQFKDTFLITASICALSKKKTTRVRNNHSMLLTQKWSEAIFRQFAAARKE
HHHHHHHHCCCCCCCEEEEEHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
SVSILERIDNQKEKLYAFDLNVIVSGDTYDEASLNASTIISYWNKGGGKAIVLDEALGIH
HHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCH
QLNLIASLPMGINKEYMFDITAKYRSMFPDQISQFIPLEADYKLNIPNLILFSRRAQIAF
HHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHCCCCCCCEECCCCEEEEECCCEEEE
VSSSNYNAYLVATSGAGKSVFLNMLAFSSYARGDRIFIIDQDNSFIKLCEAVGGQYLALD
EECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC
PSKPISFNPFSGLKNNDRDSFMEDLEYLSNLIYMLGSSKNQDRALEDERLIKAKTQAIME
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ELFLSKGNTMEVTDIRDELAKIDDQRFRDFADQLRPFCKEGIYGKYFNGPCEFNIEKEFI
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEE
VTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSSDRKSRIQIIIDEAHRFLGKNPKMDDFI
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCHHHHH
EQAYRRARKYGASAIIATQGFDDIYNAKDGGLSRAGTVIINNSAYKIFMKQTETSVNMLI
HHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCEEEEECCEEEEEEEECCCHHHHHH
KSEVFSLSETDKEILRSIMTIKGEYSELFLMTPDDVKLPYRLVMDNYFYYLTTTDATDKA
HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCEEEEEEECCCCCHH
KIKELTDQGISLGEAIELLANTKTKSNETK
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TARLKNYYLLVSIKSHTEEDVISYKHILKNILTSNNFSPVVAEPEILKPMLYELFNGNH
CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
DINNIPSYDRTCYLNRQVIMPTTEILIQDDELKIDGRSFISLTPQTFPQEAHIADFGEKL
CCCCCCCCCCEEEECCEEECCCEEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHH
GDYISRALDNNQFKDTFLITASICALSKKKTTRVRNNHSMLLTQKWSEAIFRQFAAARKE
HHHHHHHHCCCCCCCEEEEEHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
SVSILERIDNQKEKLYAFDLNVIVSGDTYDEASLNASTIISYWNKGGGKAIVLDEALGIH
HHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCH
QLNLIASLPMGINKEYMFDITAKYRSMFPDQISQFIPLEADYKLNIPNLILFSRRAQIAF
HHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHCCCCCCCEECCCCEEEEECCCEEEE
VSSSNYNAYLVATSGAGKSVFLNMLAFSSYARGDRIFIIDQDNSFIKLCEAVGGQYLALD
EECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC
PSKPISFNPFSGLKNNDRDSFMEDLEYLSNLIYMLGSSKNQDRALEDERLIKAKTQAIME
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ELFLSKGNTMEVTDIRDELAKIDDQRFRDFADQLRPFCKEGIYGKYFNGPCEFNIEKEFI
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEE
VTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSSDRKSRIQIIIDEAHRFLGKNPKMDDFI
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCHHHHH
EQAYRRARKYGASAIIATQGFDDIYNAKDGGLSRAGTVIINNSAYKIFMKQTETSVNMLI
HHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCEEEEECCEEEEEEEECCCHHHHHH
KSEVFSLSETDKEILRSIMTIKGEYSELFLMTPDDVKLPYRLVMDNYFYYLTTTDATDKA
HHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCEEEEEEECCCCCHH
KIKELTDQGISLGEAIELLANTKTKSNETK
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]