Click here to switch to the map view.

The map label for this gene is btuF [H]

Identifier: 153951794

GI number: 153951794

Start: 1741246

End: 1742052

Strand: Direct

Name: btuF [H]

Synonym: JJD26997_1972

Alternate gene names: 153951794

Gene position: 1741246-1742052 (Clockwise)

Preceding gene: 153951086

Following gene: 153952343

Centisome position: 94.37

GC content: 27.88

Gene sequence:

>807_bases
ATGAAAAAAATTTTAATTATTATGAGTTTGTTTTTAATCACACTAAATGCAAAAGAACGCCTTGTAGTGCTTGATCCTGC
AAGCATAGAAACCCTTTTTATGTTTAAGGCTGAAGATCAAATCGTAGGCATTGCCCATTTACAACACTCAAATATCTATC
CCAAAGATCAAACCTCAAAACTTACAAGTGTAGGCACTTTTTCAAATCCTTCGCTTGAAAAAATAGTAGCATTAAAACCA
AGTTTGGTGATTTTAAGCTCTTATTCTTTAAATTTAGAAGAAGGACTTAAAAATTTTGGTATCAAAAGTATCAATTTAAA
AGCCGATCGTTTAGAAGATATAACAAAAAATATCACAATCTTAGGTCAAATTACCAAAAAAGAAAAAGAAGCAGAGCTTT
TAAAACAAGAATTTGCTCAAAATTTAAAAAAATTAAGCAATAAACCCTTAAATAAAAGTGCGATTTATCTTTATTCTAGC
AACCCTTTAATGGCTTTTAATGATAATTCTTTAATAGCTGATATTTTAAGACTTATAGGGATTAAAAATTTAAGCCCACA
AAGTCAAATTTCAAGACCTGTTATATCAGCAGAATACATACTGAAACAAAATCCAGACATACTCATTCTTGGAATCGGTG
CCAAGAATAATCTTTTAGATACAAATGCTTTATTGAAAAATACTAAAGCAGTTAAAACAGGAAGTATTTATTTTAACAAA
GATACACCTATATTATTACGTCTTAGTCCTAAGATAATAGATAGAATTCAAGAATTTAAAACAAAGCTAGAAAATAACAA
TTTTTAA

Upstream 100 bases:

>100_bases
AACTTTTTACTCAAGAAATTTTAAAAGAAATTTATGATTTAAACTGCGAGATTATTTATCAAAATTCTAAACCTTATATT
TTAGCTTTAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TCACTCAATCTTACTTTAAAAAATTCGCAAGTTTGACAAAGTTTTTCTATGCATTTATCTTCTTCAAAAGCTTTTTTTAT
CATCTTGATACGCGGTGATT

Product: putative hemin ABC transporter, periplasmic hemin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKKILIIMSLFLITLNAKERLVVLDPASIETLFMFKAEDQIVGIAHLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKP
SLVILSSYSLNLEEGLKNFGIKSINLKADRLEDITKNITILGQITKKEKEAELLKQEFAQNLKKLSNKPLNKSAIYLYSS
NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGIGAKNNLLDTNALLKNTKAVKTGSIYFNK
DTPILLRLSPKIIDRIQEFKTKLENNNF

Sequences:

>Translated_268_residues
MKKILIIMSLFLITLNAKERLVVLDPASIETLFMFKAEDQIVGIAHLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKP
SLVILSSYSLNLEEGLKNFGIKSINLKADRLEDITKNITILGQITKKEKEAELLKQEFAQNLKKLSNKPLNKSAIYLYSS
NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGIGAKNNLLDTNALLKNTKAVKTGSIYFNK
DTPILLRLSPKIIDRIQEFKTKLENNNF
>Mature_268_residues
MKKILIIMSLFLITLNAKERLVVLDPASIETLFMFKAEDQIVGIAHLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKP
SLVILSSYSLNLEEGLKNFGIKSINLKADRLEDITKNITILGQITKKEKEAELLKQEFAQNLKKLSNKPLNKSAIYLYSS
NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGIGAKNNLLDTNALLKNTKAVKTGSIYFNK
DTPILLRLSPKIIDRIQEFKTKLENNNF

Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=220, Percent_Identity=30.4545454545455, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 30049; Mature: 30049

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIIMSLFLITLNAKERLVVLDPASIETLFMFKAEDQIVGIAHLQHSNIYPKDQTSK
CCHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCC
LTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIKSINLKADRLEDITKNITI
CEECCCCCCCCHHHHEEECCCEEEEEECCCCHHHHHHHCCEEEEECCHHHHHHHHCCEEE
LGQITKKEKEAELLKQEFAQNLKKLSNKPLNKSAIYLYSSNPLMAFNDNSLIADILRLIG
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHC
IKNLSPQSQISRPVISAEYILKQNPDILILGIGAKNNLLDTNALLKNTKAVKTGSIYFNK
CCCCCCHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCEEEECEEEECC
DTPILLRLSPKIIDRIQEFKTKLENNNF
CCCEEEEECHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKILIIMSLFLITLNAKERLVVLDPASIETLFMFKAEDQIVGIAHLQHSNIYPKDQTSK
CCHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCC
LTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIKSINLKADRLEDITKNITI
CEECCCCCCCCHHHHEEECCCEEEEEECCCCHHHHHHHCCEEEEECCHHHHHHHHCCEEE
LGQITKKEKEAELLKQEFAQNLKKLSNKPLNKSAIYLYSSNPLMAFNDNSLIADILRLIG
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHC
IKNLSPQSQISRPVISAEYILKQNPDILILGIGAKNNLLDTNALLKNTKAVKTGSIYFNK
CCCCCCHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCEEEECEEEECC
DTPILLRLSPKIIDRIQEFKTKLENNNF
CCCEEEEECHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA