| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is wlaX
Identifier: 153951632
GI number: 153951632
Start: 530757
End: 531551
Strand: Direct
Name: wlaX
Synonym: JJD26997_0589
Alternate gene names: NA
Gene position: 530757-531551 (Clockwise)
Preceding gene: 153952405
Following gene: 153952586
Centisome position: 28.77
GC content: 29.69
Gene sequence:
>795_bases ATGGCAAAAAATGAAGGTTATATTTGTGTTTTTGATTGTGAGAGTGTACCAGATGTTGAGCTTATTCGCAAAACTTTAGG TTTTGAAGGAAGTGATTTGGAGATAAGTTTAAGAGCACTTCAGTGGCAAAAAGAACAAAGCGGAAGTGAGTTTTTGCCTT TACCTTATCATAAAATCATCAGTATTTGTGCGGTTTTAAGTGATAATTTTGGAAAATTTATCAAAGTAAATAAAATCGAT GGACAAAATGAAAAAGAAATGATTGAGAATTTTTTTAATTTTATAGAAAATTATGAGCCAAAATTAGTCAGTTTTAATGG TAAAAATTTCGATATGCCTGTTCTTGTTTTAAGGGCTTTAAAATACAATTTAAAAGCAGCAACTTATTTAGATACTCAAA GCGATAAATGGAATAATTATAAAACAAGATTTTCAGAATTAAAACATTGTGATTTATTGGAATCCTTAGGATCTAATGGG CGTGGAATAAAGCTTGATACACTTTGTTCTATGGTGGGTTTGCCAGGAAAATATGATATGCATGGCGATGAGGTAATGAA GCTTTTTTATGGAAATGAACTTGAAAAAATCCACGAATATTGTGAAAGTGATGTTTTAAATACCTATATGCTTTTTTTAA AATATGAACTTATTAAAGGTAATGTTAGCGAGGAAGATTATGTTGATTTTCTTTCTTGTATGAGAGATTTCTTGCGTGCA AAAAAAGCAAATCGTTCTTATACAGAAGTTTTTGCAAAAGCTTGCGAGAGTGAAATTTTAAAAGTTCAACCTTAA
Upstream 100 bases:
>100_bases TCACCAAGTGCTGATAAACGAACGATTGCTATTTTCATTAAAACCTAATTTTGAAATTTTTGCTATGATTTTAGCGAAAT TATTTAAAAAAAGGTTAAAA
Downstream 100 bases:
>100_bases GCATTTAAGAAAATATATTAAAATTTATTTTTGACATTTTTTAAAAAAAGGAATAATGATGAAAATTCTTATTAGCGGTG GTGCAGGTTATATAGGTTCT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEISLRALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKID GQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG RGIKLDTLCSMVGLPGKYDMHGDEVMKLFYGNELEKIHEYCESDVLNTYMLFLKYELIKGNVSEEDYVDFLSCMRDFLRA KKANRSYTEVFAKACESEILKVQP
Sequences:
>Translated_264_residues MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEISLRALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKID GQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG RGIKLDTLCSMVGLPGKYDMHGDEVMKLFYGNELEKIHEYCESDVLNTYMLFLKYELIKGNVSEEDYVDFLSCMRDFLRA KKANRSYTEVFAKACESEILKVQP >Mature_263_residues AKNEGYICVFDCESVPDVELIRKTLGFEGSDLEISLRALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDG QNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGR GIKLDTLCSMVGLPGKYDMHGDEVMKLFYGNELEKIHEYCESDVLNTYMLFLKYELIKGNVSEEDYVDFLSCMRDFLRAK KANRSYTEVFAKACESEILKVQP
Specific function: Unknown
COG id: COG3298
COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30509; Mature: 30378
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEISLRALQWQKEQSGSEFLPLPYHKII CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHH SICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRAL HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH KYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDM HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCC HGDEVMKLFYGNELEKIHEYCESDVLNTYMLFLKYELIKGNVSEEDYVDFLSCMRDFLRA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KKANRSYTEVFAKACESEILKVQP HHCCCHHHHHHHHHHHHHCEECCC >Mature Secondary Structure AKNEGYICVFDCESVPDVELIRKTLGFEGSDLEISLRALQWQKEQSGSEFLPLPYHKII CCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHH SICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRAL HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH KYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDM HHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCC HGDEVMKLFYGNELEKIHEYCESDVLNTYMLFLKYELIKGNVSEEDYVDFLSCMRDFLRA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KKANRSYTEVFAKACESEILKVQP HHCCCHHHHHHHHHHHHHCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA