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The map label for this gene is petC

Identifier: 153951440

GI number: 153951440

Start: 492838

End: 493962

Strand: Direct

Name: petC

Synonym: JJD26997_0545

Alternate gene names: NA

Gene position: 492838-493962 (Clockwise)

Preceding gene: 153952423

Following gene: 153951326

Centisome position: 26.71

GC content: 32.53

Gene sequence:

>1125_bases
ATGAGGGAAATAAAAATATTTTTAGTTGTAGTAGTTTTTACTGCACTTGTATATTGGGGGGTAGAGCCTTATGCTCATTC
AGTGATGAAACCTCATGTTGTTCCTGCAAATTTTGATTTTGCTGTTGAAGATACTACTTTTGCAAAAGGTATAGTTGAAG
CTAAAGAATTAGCTCTAAAAGATGCACAAGCTTCAGGAGACGCTAAAAGAATAGAGAGTGCAAACAAAGAACTTGAAAAA
GCAAAAGAAGAATTAAGCAAGGTTGAAACACTTTGGGCAGATGTTGCAAAGATCGATTTTGCTAAGGGTGATGCAAAAAA
AGGTAAAGAATTTTTTGAAAATAACTGTTTTGCATGTCATGGTGTAAAAGAAGATGGAATAGCAGCTAATATTACTGATT
CTTCTATGGGAGTAATACCACCTGATCTTAGTGCAGCTGGTGCTATTTTTGATGAAAAATTTTTAGCAGCTTTGATTATG
CATCCTGCATTTGCTTTAAAAGTAGATCATAAATTTGGTGATGCTTTTATTATGACAGCTTACAATAAAGATACTTCAGG
AGAAAGTGAAGAAACTACAAATGCAAATATAGCCAATGTAATTGCTTATCTTAAAGATGTGAGTGTTAAATTTGAAGCTA
ATGAAGATGCTACTATTAAGAAAGATGTTGAGGCAAAATATGCTAAAATGGAAAATAGTGCTCAAAAAACGGCTTTAATG
GAAAAAGATATAAAATTTGCTAAAGATAAAGCAACTTTTATTGAGGCTTGCGGACGTTGTCATGATATGAAATACGATAG
CTTTTTTACTCCATCAAATCAAAACGATTTAAAAACTTATTTAGGTTCTGTTCCGCCTGATCTTTCTATGATGATAAGAT
CTCGTGGTGAGCAATATTTACATGATTTTATTAATAACACTCAAAAACTTCTTCCAGGAACCGCTATGCCAAGAGTAGGT
TTAACAGAAGCTGCACAGGCTAAGGTTGTATCTTATATTGATCAAGTGGGTGATAGCAAAAAAGAAGAAAGAAAAACTAC
AGGAATTTATGTAATGATATTCTTTGTAATTTTAAGTATTTTTGCTATAGGTTGGAAGCGTTCTGTTTGGTCTAAATTAC
ATTAA

Upstream 100 bases:

>100_bases
TAAATGCTTGGGTAGGATTTTATGCTTCTATAGTATTTTTACTTTTACTTATTGTAGTTTTACCGGTTATTACTATTATA
GAGAGAAAAGGAGCTAAACA

Downstream 100 bases:

>100_bases
TATTATAAAATTTTTGCCACTATTTTATATCTGTGGCAAAAATTCTATCTTTTCTTCGATTTTATTAAATTTTAAACCTA
ATTAAGAGATACTATCAAAT

Product: ubiquinol--cytochrome c reductase, cytochrome c1 subunit

Products: Q; ferrocytochrome c

Alternate protein names: Ubiquinol-Cytochrome C Reductase Cytochrome C1 Subunit; Cytochrome C Subfamily Protein; Ubiquinol-Cytochrome C Reductase Cytochrome C Subunit; Ubiquinol-Cytochrome C Reductase Cytochrome Subunit C; Cytochrome C Class I; Cytochrome C1-Like Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVVPANFDFAVEDTTFAKGIVEAKELALKDAQASGDAKRIESANKELEK
AKEELSKVETLWADVAKIDFAKGDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
HPAFALKVDHKFGDAFIMTAYNKDTSGESEETTNANIANVIAYLKDVSVKFEANEDATIKKDVEAKYAKMENSAQKTALM
EKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVG
LTEAAQAKVVSYIDQVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH

Sequences:

>Translated_374_residues
MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVVPANFDFAVEDTTFAKGIVEAKELALKDAQASGDAKRIESANKELEK
AKEELSKVETLWADVAKIDFAKGDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
HPAFALKVDHKFGDAFIMTAYNKDTSGESEETTNANIANVIAYLKDVSVKFEANEDATIKKDVEAKYAKMENSAQKTALM
EKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVG
LTEAAQAKVVSYIDQVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH
>Mature_374_residues
MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVVPANFDFAVEDTTFAKGIVEAKELALKDAQASGDAKRIESANKELEK
AKEELSKVETLWADVAKIDFAKGDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
HPAFALKVDHKFGDAFIMTAYNKDTSGESEETTNANIANVIAYLKDVSVKFEANEDATIKKDVEAKYAKMENSAQKTALM
EKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVG
LTEAAQAKVVSYIDQVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH

Specific function: Unknown

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.10.2.2

Molecular weight: Translated: 41538; Mature: 41538

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS51007 CYTC ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVVPANFDFAVEDTTFAKGIVEAKELALK
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
DAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAKGDAKKGKEFFENNCFACH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEE
GVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIMHPAFALKVDHKFGDAFIMTA
CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEEE
YNKDTSGESEETTNANIANVIAYLKDVSVKFEANEDATIKKDVEAKYAKMENSAQKTALM
ECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYLGSVPPDLSMMIRSRGEQYL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHCCCCCHHHHHHHHCCHHHH
HDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYIDQVGDSKKEERKTTGIYVMIFFVILSI
HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FAIGWKRSVWSKLH
HHHHHHHHHHHHCC
>Mature Secondary Structure
MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVVPANFDFAVEDTTFAKGIVEAKELALK
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
DAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAKGDAKKGKEFFENNCFACH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEE
GVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIMHPAFALKVDHKFGDAFIMTA
CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEEE
YNKDTSGESEETTNANIANVIAYLKDVSVKFEANEDATIKKDVEAKYAKMENSAQKTALM
ECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYLGSVPPDLSMMIRSRGEQYL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHCCCCCHHHHHHHHCCHHHH
HDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYIDQVGDSKKEERKTTGIYVMIFFVILSI
HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FAIGWKRSVWSKLH
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA