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The map label for this gene is gcp [H]

Identifier: 153951317

GI number: 153951317

Start: 319772

End: 320779

Strand: Direct

Name: gcp [H]

Synonym: JJD26997_0366

Alternate gene names: 153951317

Gene position: 319772-320779 (Clockwise)

Preceding gene: 153952079

Following gene: 153952006

Centisome position: 17.33

GC content: 31.75

Gene sequence:

>1008_bases
ATGAAAAATCTTATCCTAGCTATAGAAAGTTCTTGTGATGATAGTTCTATAGCTATCATTGATAAAAATACCTTAGAATG
TAAATTTCATAAAAAAATTTCCCAAGAATTAGAGCATAGCATCTATGGAGGAGTGGTGCCTGAACTTGCTGCAAGGCTTC
ATAGTGAGGCTTTACCAAAGATACTTAAGCAAAGTAAAAAATATTTTAAAAATCTTTGTGCCATAGCTGTGACAAATGAA
CCTGGGCTTAGCGTTTCTTTGCTTGGTGGAATTTCTATGGCAAAAACCTTAGCAAGTGCTCTCAATTTACCTTTAATCCC
TATAAACCATCTTAAAGGTCATATTTATAGTCTTTTTTTGGAAGAAAAAATTTCTTTAGATAGGGGAATTTTGCTTGTCA
GTGGTGGGCACACTATGGTGCTTTATCTTAAAGATGATGCAAACTTAGAGCTTTTAGCAAGCACAAATGATGATAGCTTT
GGAGAAAGTTTTGATAAAGTGGCTAAAATGATGAATTTAGGTTATCCTGGTGGGGTTATCATAGAAAATTTAGCAAAAAA
TGCCAAGCTTAAAAATATCTCTTTTAACACACCTTTAAAGCATTCTAAAGAACTCGCTTTCAGTTTTTCAGGGCTTAAAA
ATGCAGTGCGTTTGGAAATTTTAAAACATGAAAATTTAAATGAAGATACAAAAGCAGAAATAGCTTATGCCTTTGAAAAT
ACGGCTTGTGATCATATCATGGATAAATTAGAAAAAATTTTTAATCTTTATAAATTTAAAAATTTTGGCGTTGTAGGCGG
AGCTAGTGCAAATCTTAACTTGCGTTCGCGTTTGCAAAATTTATGTCAAAAATATAATGCAAATTTAAAACTAGCTCCTT
TAAAATTCTGCTCTGATAATGCTTTGATGATAGCAAGAGCCGCAGTTGATGCTTATGAAAAAAAGGAATTTGTAAGCATA
GAAGAAGATATTTTAAGCCCTAAAAATAAAAATTTTTCAAGGATATAG

Upstream 100 bases:

>100_bases
ATGGCAAGTTGATCAAAAATGCCAAAAATTTGGATTTAAACACTCTTAAAATGGCAAGATCAAAAGATAAATTCTTAGGT
TCTATTTTGGTGGAATTTGA

Downstream 100 bases:

>100_bases
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATCTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATG

Product: putative DNA-binding/iron metalloprotein/AP endonuclease

Products: NA

Alternate protein names: Glycoprotease [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGVVPELAARLHSEALPKILKQSKKYFKNLCAIAVTNE
PGLSVSLLGGISMAKTLASALNLPLIPINHLKGHIYSLFLEEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSF
GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRLEILKHENLNEDTKAEIAYAFEN
TACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSI
EEDILSPKNKNFSRI

Sequences:

>Translated_335_residues
MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGVVPELAARLHSEALPKILKQSKKYFKNLCAIAVTNE
PGLSVSLLGGISMAKTLASALNLPLIPINHLKGHIYSLFLEEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSF
GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRLEILKHENLNEDTKAEIAYAFEN
TACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSI
EEDILSPKNKNFSRI
>Mature_335_residues
MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGVVPELAARLHSEALPKILKQSKKYFKNLCAIAVTNE
PGLSVSLLGGISMAKTLASALNLPLIPINHLKGHIYSLFLEEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSF
GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRLEILKHENLNEDTKAEIAYAFEN
TACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSI
EEDILSPKNKNFSRI

Specific function: Could Be A Metalloprotease. [C]

COG id: COG0533

COG function: function code O; Metal-dependent proteases with possible chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Homo sapiens, GI116812636, Length=338, Percent_Identity=30.1775147928994, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI8923380, Length=280, Percent_Identity=26.7857142857143, Blast_Score=89, Evalue=6e-18,
Organism=Escherichia coli, GI1789445, Length=312, Percent_Identity=37.1794871794872, Blast_Score=203, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17557464, Length=321, Percent_Identity=29.2834890965732, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71995670, Length=323, Percent_Identity=26.0061919504644, Blast_Score=91, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6320099, Length=350, Percent_Identity=31.7142857142857, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6322891, Length=309, Percent_Identity=24.2718446601942, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20129063, Length=356, Percent_Identity=29.4943820224719, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI21357207, Length=340, Percent_Identity=25.8823529411765, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022450
- InterPro:   IPR000905
- InterPro:   IPR017860
- InterPro:   IPR017861 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: =3.4.24.57 [H]

Molecular weight: Translated: 37108; Mature: 37108

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS01016 GLYCOPROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGVVPELAARLHSEALPK
CCCEEEEEECCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILKQSKKYFKNLCAIAVTNEPGLSVSLLGGISMAKTLASALNLPLIPINHLKGHIYSLFL
HHHHHHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
EEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSFGESFDKVAKMMNLGYPGGVI
HHHHCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHH
IENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRLEILKHENLNEDTKAEIAYAFEN
HHHHHCCCEECEEECCCCCCCCHHHHHHHHHHCHHHEEEEECCCCCCCCCHHHEEEEECC
TACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDN
CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
ALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSRI
CEEEEHHHHHHHHHHHHHCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGVVPELAARLHSEALPK
CCCEEEEEECCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILKQSKKYFKNLCAIAVTNEPGLSVSLLGGISMAKTLASALNLPLIPINHLKGHIYSLFL
HHHHHHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
EEKISLDRGILLVSGGHTMVLYLKDDANLELLASTNDDSFGESFDKVAKMMNLGYPGGVI
HHHHCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHH
IENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRLEILKHENLNEDTKAEIAYAFEN
HHHHHCCCEECEEECCCCCCCCHHHHHHHHHHCHHHEEEEECCCCCCCCCHHHEEEEECC
TACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDN
CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC
ALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSRI
CEEEEHHHHHHHHHHHHHCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA