| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is purH [H]
Identifier: 153951239
GI number: 153951239
Start: 747245
End: 748777
Strand: Direct
Name: purH [H]
Synonym: JJD26997_0828
Alternate gene names: 153951239
Gene position: 747245-748777 (Clockwise)
Preceding gene: 153951540
Following gene: 153951325
Centisome position: 40.5
GC content: 33.86
Gene sequence:
>1533_bases ATGAGAGCATTGCTTAGTGTGAGTGATAAAGAAGGCATAGTGGAATTTGGCAAAGAGCTTGAAAATTTAGGCTTTGAGAT TCTTTCAACAGGTGGGACTTTTAAGCTTTTAAAAGAAAATGGAGTAAAAGTTATAGAAGTGAGTGATTTTACAAAAAGTC CTGAGCTTTTTGAAGGGCGTGTGAAGACTTTGCATCCTAAAATTCATGGTGGAATTTTACACAAAAGAAACGATGAAAAT CATATCAAACAAGCAAAAGAAAATGAAATTTTAGGCATTGATCTAGTTTGTGTAAATTTGTATCCTTTTAAAAAAACCAC TATTATGAGTGATGATTTTGATGAGATTATAGAAAATATTGACATAGGCGGGCCTGCGATGATAAGAAGTGCGGCAAAAA ACTATAAAGATGTTATGGTGCTTTGCGATCGGCTTGATTATGAAAAAGTTATTGAGACTTTAAAAAAGAATCAAAATGAT GAAAATTTTCGCCTGAGTTTAATGATAAAGGCTTATGAGTATACGGCAAATTACGATGCTTATATTGCAAATTATATGAA TGAACGCTTTAACGGAGGTTTTGGAGCGAGTAAATTTATAGTAGGACAAAAAGTATTTGATACAAAATATGGAGAAAATC CACATCAAAAAGGAGCTTTATACGAGTTTGATGCCTTTTTTAGTGCAAATTTCAAAGCCCTTAAAGGCGAAGCAAGTTTT AACAATCTAACCGATATTAACGCAGCTTTAAACTTAGCTAGTAGTTTTGATAAAGCTCCAGCTATTGCTATAGTAAAACA TGGAAATTCTTGTGGTTTTGCTATAAAAGAAAATTTAGTACAAAGCTATATACATGCTTTAAAATCCGATAGCGTTAGTG CTTATGGAGGAGTGGTTGCAATCAATGGAACTCTTGATGAGGCTCTAGCAAATAAAATCAATGAAATTTATGTAGAAGTA ATCATCGCAGCCAATGTAGATGAAAAAGCTTTAGCTGTGTTTGAAGGTAAAAAACGCATTAAAATTTTCACTCAAGAAAG TCCGTTTTTAATTCGTAGTTTTGATAAATATGATTTTAAACATATTGATGGGGGTTTTGTGTATCAAAACAGCGATGAAG CGGATGAAGATGAACTTAAAAATGCAAAGCTTATGAGTCAAAGAGAGGCAAGCAAGGAAGAATTAAAAGATCTTGAAATC GCTATGAAAATAGCAGCATTTACCAAATCAAACAATGTTGTTTATGTAAAAAATGGCGCTATGGTGGCTATAGGTATGGG TATGACAAGCAGAATCGATGCAGCAAAGGCAGCTACTTTTAAAGCCAAAGAAATGGGGCTTGATTTACAAGGTTGCGTTT TAGCAAGTGAAGCCTTTTTTCCATTTAGAGATAGCATAGATGAAGCAAGTAAAGTAGGGGTTAAAGCTATAGTAGAACCA GGTGGAAGTATAAGAGATGATGAAGTAGTAAAGGCGGCTGATGAGTATGGTATGGCGCTTTATTTCACAGGAGTAAGACA TTTCTTACATTAA
Upstream 100 bases:
>100_bases CAAACAATGTCAGCGAAGAAGAGCTTAAAATCGGCGTAGAGAAATTTCAAAAAATCAACGAAGCTTATGAAAAAGTTAAA AAACATTTAGAAAGGTAAAA
Downstream 100 bases:
>100_bases GTTTAATGGAATGTTATGTTTTTTACATAATTTAATAAAAATTAAATAAATTATATGTAAAATATTTCCGAAAAATTTTA TTTCTAGGGAACTGTGATGT
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGVKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKRNDEN HIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDRLDYEKVIETLKKNQND ENFRLSLMIKAYEYTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYEFDAFFSANFKALKGEASF NNLTDINAALNLASSFDKAPAIAIVKHGNSCGFAIKENLVQSYIHALKSDSVSAYGGVVAINGTLDEALANKINEIYVEV IIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEADEDELKNAKLMSQREASKEELKDLEI AMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAATFKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEP GGSIRDDEVVKAADEYGMALYFTGVRHFLH
Sequences:
>Translated_510_residues MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGVKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKRNDEN HIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDRLDYEKVIETLKKNQND ENFRLSLMIKAYEYTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYEFDAFFSANFKALKGEASF NNLTDINAALNLASSFDKAPAIAIVKHGNSCGFAIKENLVQSYIHALKSDSVSAYGGVVAINGTLDEALANKINEIYVEV IIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEADEDELKNAKLMSQREASKEELKDLEI AMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAATFKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEP GGSIRDDEVVKAADEYGMALYFTGVRHFLH >Mature_510_residues MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGVKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKRNDEN HIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDRLDYEKVIETLKKNQND ENFRLSLMIKAYEYTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYEFDAFFSANFKALKGEASF NNLTDINAALNLASSFDKAPAIAIVKHGNSCGFAIKENLVQSYIHALKSDSVSAYGGVVAINGTLDEALANKINEIYVEV IIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEADEDELKNAKLMSQREASKEELKDLEI AMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAATFKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEP GGSIRDDEVVKAADEYGMALYFTGVRHFLH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=485, Percent_Identity=32.1649484536082, Blast_Score=208, Evalue=8e-54, Organism=Escherichia coli, GI1790439, Length=534, Percent_Identity=44.0074906367041, Blast_Score=424, Evalue=1e-120, Organism=Caenorhabditis elegans, GI71985564, Length=501, Percent_Identity=31.3373253493014, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71985574, Length=333, Percent_Identity=25.5255255255255, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=50, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323768, Length=474, Percent_Identity=31.4345991561181, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6323056, Length=485, Percent_Identity=31.5463917525773, Blast_Score=209, Evalue=7e-55, Organism=Drosophila melanogaster, GI24649832, Length=473, Percent_Identity=33.1923890063425, Blast_Score=224, Evalue=1e-58,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56599; Mature: 56599
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGVKVIEVSDFTKSPELFEGR CCCEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHCCH VKTLHPKIHGGILHKRNDENHIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENI HHHCCCHHHCCCEECCCCHHHHHHHHCCCEEEEEEEEEEEECCCCEEECCCCHHHHHHHC DIGGPAMIRSAAKNYKDVMVLCDRLDYEKVIETLKKNQNDENFRLSLMIKAYEYTANYDA CCCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHH YIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYEFDAFFSANFKALKGEASF HHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCEEEEHHHHCCCCEEEECCCCC NNLTDINAALNLASSFDKAPAIAIVKHGNSCGFAIKENLVQSYIHALKSDSVSAYGGVVA CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE INGTLDEALANKINEIYVEVIIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFK ECCCHHHHHHHHHHHEEEEEEEEECCCHHHHHEECCCCEEEEEECCCCCEEEECCCCCCE HIDGGFVYQNSDEADEDELKNAKLMSQREASKEELKDLEIAMKIAAFTKSNNVVYVKNGA ECCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEEEECCC MVAIGMGMTSRIDAAKAATFKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEP EEEEECCCCCCCCHHHHHHEEHHHHCCCHHHEEEECCCCCCCHHCHHHHHHCCEEEEECC GGSIRDDEVVKAADEYGMALYFTGVRHFLH CCCCCCHHHHHHHHHCCEEEEEEHHHHHCC >Mature Secondary Structure MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGVKVIEVSDFTKSPELFEGR CCCEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEECCCCCCCHHHCCH VKTLHPKIHGGILHKRNDENHIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENI HHHCCCHHHCCCEECCCCHHHHHHHHCCCEEEEEEEEEEEECCCCEEECCCCHHHHHHHC DIGGPAMIRSAAKNYKDVMVLCDRLDYEKVIETLKKNQNDENFRLSLMIKAYEYTANYDA CCCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHH YIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYEFDAFFSANFKALKGEASF HHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCEEEEHHHHCCCCEEEECCCCC NNLTDINAALNLASSFDKAPAIAIVKHGNSCGFAIKENLVQSYIHALKSDSVSAYGGVVA CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE INGTLDEALANKINEIYVEVIIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFK ECCCHHHHHHHHHHHEEEEEEEEECCCHHHHHEECCCCEEEEEECCCCCEEEECCCCCCE HIDGGFVYQNSDEADEDELKNAKLMSQREASKEELKDLEIAMKIAAFTKSNNVVYVKNGA ECCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCCCEEEEECCC MVAIGMGMTSRIDAAKAATFKAKEMGLDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEP EEEEECCCCCCCCHHHHHHEEHHHHCCCHHHEEEECCCCCCCHHCHHHHHHCCEEEEECC GGSIRDDEVVKAADEYGMALYFTGVRHFLH CCCCCCHHHHHHHHHCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA