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The map label for this gene is tolB [H]

Identifier: 153951205

GI number: 153951205

Start: 119371

End: 120579

Strand: Direct

Name: tolB [H]

Synonym: JJD26997_0119

Alternate gene names: 153951205

Gene position: 119371-120579 (Clockwise)

Preceding gene: 153952317

Following gene: 153952154

Centisome position: 6.47

GC content: 29.45

Gene sequence:

>1209_bases
ATGAAAAAAATTTTAGCAATTTTTTTAGTCTTTTTAGGAAGTCTTTGGGCAGAAGATCCAGTGATTGATGTTGTTAATTC
TGGTGTAGTTTTACCAAAGATTATCGTTAAAGACAATTCAAATTTAAGTGATGAGAATTTAAAGAAAAGCTTTTATAATA
TCATTGTAAACGATTTGAAAGTAAGTTCAAACTTTGAAGTTGTTGCTAATGCAACTGAGACAAGTAATTATACTTTTGAA
TACGCTTTAAATAAAAATGGTAATACTTTGAGTTTAAATGTAAAAATAAAAGCTGGTGGTTCTGATAAGTCAGAGCAAAC
TTATACCTTAAATGGTTTAGAGCAATATCCATTTTTGGCACATAAAAGCGTTAAAGCTTCTGTAAATGCTTTAGGACTTG
CCCCTGTTGATTGGATGGATCATAAAATTTTGATTGCGAGAAATTCTAGCTCTAAAAAAAGTCAAATTATTATGGCTGAT
TATACTTTAACTTATCAAAAGGTTATTGTTGATGGTGGGCTTAATTTATTTCCAAAATGGGGAAATAAAGAACAAACTCT
ATTTTATTATACAGCTTATGATCATGATAGGCCAACTTTATACCGTTATGATTTAAATACCAATAAAGCTAGTAAAATTT
TATCAAGTGGCGGTATGGTTGTAGCAAGTGATGTGAGTGTAGATGGAAGTAAACTACTTGTTACCATGGCTCCAAAAGAT
CAGCCTGATGTTTATTTATATGACCTAAATACCAAAAATCTAACACAATTAACTAATTATTCTGGTATTGATGTTAATGG
AAATTTTATTGGCTCAGATGATAGTAAAGTGGTATTTGTAAGTGATCGTTTAGGATATCCTAATATTTTTATGCAAGATT
TAAATAGTAATAGTGCTGAACAAGTTGTTTTTCATGGTAGAAACAATTCGGCTGTTTCGACTTATAAAGATTTTTTGGTT
TATTCAAGTCGTGAACCAAATCAAGCAGGTGTTTTTAATATTTATTTGATGTCAATTAATAGTGATTATATTCGTCAACT
TACAGCAAATGGAAAAAATTTATTTCCAAGATTTTCTAGTGATGGTGGAAGTATAGTATTTATCAAATATTTAGGTGCAC
AAAGTGCTTTGGGTGTTATTCGTGTAAATGCAAATAAGACTTTTTATTTTCCTCTTAGGGTTGGAAAAATTCAATCAATT
GATTGGTAA

Upstream 100 bases:

>100_bases
AAAAGGTAAATTTATTACTTATCCTCCGCAAAATAAAAATATAAGCATTACCATGAATTTAAGAGATGAAGCAAAAGTTA
AAAATGATTAGGAGAAAAAA

Downstream 100 bases:

>100_bases
AAATTTCAATTTTAGGTTAAAATTAATTACAAATTAGATATAATAGTAAGAATTTATTAACTTTGAAAGGTCATAAATGA
AAAAAATTCTTTTTACTTCA

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKKILAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFE
YALNKNGNTLSLNVKIKAGGSDKSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSSGGMVVASDVSVDGSKLLVTMAPKD
QPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLV
YSSREPNQAGVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQSI
DW

Sequences:

>Translated_402_residues
MKKILAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFE
YALNKNGNTLSLNVKIKAGGSDKSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSSGGMVVASDVSVDGSKLLVTMAPKD
QPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLV
YSSREPNQAGVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQSI
DW
>Mature_402_residues
MKKILAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFE
YALNKNGNTLSLNVKIKAGGSDKSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSSGGMVVASDVSVDGSKLLVTMAPKD
QPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLV
YSSREPNQAGVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQSI
DW

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 44751; Mature: 44751

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVNDLK
CHHHHHHHHHHHHHHCCCCCEEEHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHEEEEEE
VSSNFEVVANATETSNYTFEYALNKNGNTLSLNVKIKAGGSDKSEQTYTLNGLEQYPFLA
ECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCEEE
HKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMADYTLTYQKVIVDGGLNLFPKW
CCCHHCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCEEEECC
GNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSSGGMVVASDVSVDGSKLLVTMAPKD
CCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCEEEEEECCCC
QPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNSNSAE
CCCEEEEECCCCCCHHHCCCCCEEECCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCE
QVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANGKNLFPRFSS
EEEEECCCCCCHHHEEEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHCCCCEECCEECC
DGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQSIDW
CCCCEEEEEEECCCCCEEEEEEECCEEEEEEEEECCEECCCC
>Mature Secondary Structure
MKKILAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVNDLK
CHHHHHHHHHHHHHHCCCCCEEEHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHEEEEEE
VSSNFEVVANATETSNYTFEYALNKNGNTLSLNVKIKAGGSDKSEQTYTLNGLEQYPFLA
ECCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCEEE
HKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMADYTLTYQKVIVDGGLNLFPKW
CCCHHCCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCEEEECC
GNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSSGGMVVASDVSVDGSKLLVTMAPKD
CCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCEEEEEECCCC
QPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNSNSAE
CCCEEEEECCCCCCHHHCCCCCEEECCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCE
QVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANGKNLFPRFSS
EEEEECCCCCCHHHEEEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHCCCCEECCEECC
DGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQSIDW
CCCCEEEEEEECCCCCEEEEEEECCEEEEEEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]