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The map label for this gene is 153951190

Identifier: 153951190

GI number: 153951190

Start: 850357

End: 850776

Strand: Direct

Name: 153951190

Synonym: JJD26997_0957

Alternate gene names: NA

Gene position: 850357-850776 (Clockwise)

Preceding gene: 153952160

Following gene: 153952468

Centisome position: 46.09

GC content: 25.24

Gene sequence:

>420_bases
ATGAAAAAAGTTTATTTGGATACAAACATTTTATTGGATTATTTTAATGCTGAAAGAGCATATCATAATGAAGCTAGACA
ATTAGTATATTATTTACTTACAAATAATATTCAAATTGTTTTTTCCGAAGATATGATTTCTACTTTGGCGTATATACTAA
AAAAAACTAACATAGATATGATGCAATTCTATAATTACTTAAGCAAAATAACTCTTGATCCGAAAATATTAATTTGTTCT
TTTTCTGGATCAGTAATTAGAAGTGCTTGTCAAATATGCCAATCTTGCAATGATGACTTTGAAGACTATTTGCAATATTT
TTGTGCTGAAAAAGAAAGTTGCTGTGCTATTTATACTATGGATAAAAATTTTCCAAATTTAAAAATACCTATAAAAAGAT
ATGGTGAGATTGATATGTGA

Upstream 100 bases:

>100_bases
TGTGTGGTGCTTTAACAGGAGCATATCACCCTACAAAATCTGCCAAAGAATTAAAAAGAGAAAAATTAGATCAAGATTTA
AAAGAAGGTAGAATATAAAA

Downstream 100 bases:

>100_bases
ATTACCCACTTGCTTTAGCAGGTGGGTGATTCACTTTAGGTATAATTAGCAAATTAATTTTTTAGCTTTATATTGATTTG
CTAATCAAATATAGATGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKKVYLDTNILLDYFNAERAYHNEARQLVYYLLTNNIQIVFSEDMISTLAYILKKTNIDMMQFYNYLSKITLDPKILICS
FSGSVIRSACQICQSCNDDFEDYLQYFCAEKESCCAIYTMDKNFPNLKIPIKRYGEIDM

Sequences:

>Translated_139_residues
MKKVYLDTNILLDYFNAERAYHNEARQLVYYLLTNNIQIVFSEDMISTLAYILKKTNIDMMQFYNYLSKITLDPKILICS
FSGSVIRSACQICQSCNDDFEDYLQYFCAEKESCCAIYTMDKNFPNLKIPIKRYGEIDM
>Mature_139_residues
MKKVYLDTNILLDYFNAERAYHNEARQLVYYLLTNNIQIVFSEDMISTLAYILKKTNIDMMQFYNYLSKITLDPKILICS
FSGSVIRSACQICQSCNDDFEDYLQYFCAEKESCCAIYTMDKNFPNLKIPIKRYGEIDM

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 16382; Mature: 16382

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVYLDTNILLDYFNAERAYHNEARQLVYYLLTNNIQIVFSEDMISTLAYILKKTNIDM
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCHH
MQFYNYLSKITLDPKILICSFSGSVIRSACQICQSCNDDFEDYLQYFCAEKESCCAIYTM
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE
DKNFPNLKIPIKRYGEIDM
CCCCCCEEECHHCCCCCCC
>Mature Secondary Structure
MKKVYLDTNILLDYFNAERAYHNEARQLVYYLLTNNIQIVFSEDMISTLAYILKKTNIDM
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCHH
MQFYNYLSKITLDPKILICSFSGSVIRSACQICQSCNDDFEDYLQYFCAEKESCCAIYTM
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE
DKNFPNLKIPIKRYGEIDM
CCCCCCEEECHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]