| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951178
Identifier: 153951178
GI number: 153951178
Start: 498692
End: 500002
Strand: Direct
Name: 153951178
Synonym: JJD26997_0551
Alternate gene names: NA
Gene position: 498692-500002 (Clockwise)
Preceding gene: 153951433
Following gene: 153951669
Centisome position: 27.03
GC content: 29.9
Gene sequence:
>1311_bases ATGAAAATTTTACTTTTAAATGAAAACCCTGTAGTTTCAAGACTTGTAGGCCTTAGTGCTAAAAAAATGTCTTATGATTT TGAAGAACTTAATGCTTATAGTGAAAATTTGGGTAATTATGATGTGATTGTTGTAGATAGTGATACTCCAGCACCTTTAA AAATTCTTAAAGAAAAATGTGATAGATTGATTTTTTTAGCCCCGCGAAACCAAAATGTAGATATAGATGCGCAAATTTTA CAAAAACCTTTTTTACCTACAGATTTTTTAAATTTACTTAATAATAAAGATGCAAACAAACATACATCTATTGATTTGCC AATGTTAAGCAATGATGAAAATCCTTATGCTGATATAAGCTTAGATTTGGATAATTTAAATTTAGATGATTTACCTGATG AAAATTCTTTAGATATAAATTCAGAGGGAATGGAAGATTTGAGTTTTGATGATGCTCAAGATGATAATGCAAACAAAACT TTAGAAACTCAAAATTTAGAAGATGAAAATTTAGAACAAGAAACAACTAAAGAACAGACTCAAGAAGACATTCAAACTGA TTTAGATTTAACTTTAGAAGATAGCGAAAGCGAAAAAGAAGACTTAAGCCAAGAACATACAGCTTTGGATACTGAGCCTA GTTTAGATGAGCTAGATGATAAAAATGATGAAGATTTAGAAGATAATAAAGAATTGCAAGTTAATATAAGCGACTTCGAT GATCTTCTTGTAGTTGAAGAGCAAGAAAAAGAAATGGATTTTGATGATCTTCCTGAGGATGCTGAATTTTTAGGTCAGGC AAAAGATAATGAAGAATCAGAGGAAATTTTAGAGGAGTTTGCTCCTGTTGTGGAAGATATTCAAGATGAAATGGATGATT TTACTTCAAATTTGAGCACTCAAGATCAAATCAAAGAAGAACTAGATCAACTTGATGAGCTTGATTATGGTATTGATAGT GACAATAGTAGCAAGGTTTTAGAAGATTTTAAAGATGAACCAATTTTAGACGATAAAGAATTAGGAACAAATGAAGAGGA AGTGGTTGTGCCAAATTTAAATATAAGTGATTTTGATGCATTGAAAGAAAGTGATATACAAGAAGCTCTTAGAGAGGAAA TTTTAGAAAAAAATGAAGAGTCTATAGTAAGTGATGCAACTAAAGATGATAGTAGCGAAGAGATAGTTAATGAGCTTAGC CAAAGCATAGCAGGAGCGATCACTTCAAGTATTAAAGATGATACCTTAAAAGCTGCTCTTAAGGGTATGAATATAAATAT AAATATAAACATTAGTTTTAAAGAGGATTAA
Upstream 100 bases:
>100_bases TTTTAGAACTTTTTACTCATATGCAAACTCTTTTTTTCTCCTAAGGAAAGGATAAATGAAATTATCGTAAAATAGCGATT ATTTTTTAAGGATTAAAGTG
Downstream 100 bases:
>100_bases AATTGCAAGGTTTTGTTTTGTTGATTTCAGGTCCTAGTGGTGCTGGAAAATCAACTCTTTTAAAAAAACTTTTTGATGAA TTTGAAGATGAGCTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKILLLNENPVVSRLVGLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVDIDAQIL QKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDAQDDNANKT LETQNLEDENLEQETTKEQTQEDIQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQVNISDFD DLLVVEEQEKEMDFDDLPEDAEFLGQAKDNEESEEILEEFAPVVEDIQDEMDDFTSNLSTQDQIKEELDQLDELDYGIDS DNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDALKESDIQEALREEILEKNEESIVSDATKDDSSEEIVNELS QSIAGAITSSIKDDTLKAALKGMNINININISFKED
Sequences:
>Translated_436_residues MKILLLNENPVVSRLVGLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVDIDAQIL QKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDAQDDNANKT LETQNLEDENLEQETTKEQTQEDIQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQVNISDFD DLLVVEEQEKEMDFDDLPEDAEFLGQAKDNEESEEILEEFAPVVEDIQDEMDDFTSNLSTQDQIKEELDQLDELDYGIDS DNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDALKESDIQEALREEILEKNEESIVSDATKDDSSEEIVNELS QSIAGAITSSIKDDTLKAALKGMNINININISFKED >Mature_436_residues MKILLLNENPVVSRLVGLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVDIDAQIL QKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDAQDDNANKT LETQNLEDENLEQETTKEQTQEDIQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQVNISDFD DLLVVEEQEKEMDFDDLPEDAEFLGQAKDNEESEEILEEFAPVVEDIQDEMDDFTSNLSTQDQIKEELDQLDELDYGIDS DNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDALKESDIQEALREEILEKNEESIVSDATKDDSSEEIVNELS QSIAGAITSSIKDDTLKAALKGMNINININISFKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49350; Mature: 49350
Theoretical pI: Translated: 3.54; Mature: 3.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLLNENPVVSRLVGLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKC CEEEEECCCHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH DRLIFLAPRNQNVDIDAQILQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADIS CCEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECCEECCCCCCCEEEE LDLDNLNLDDLPDENSLDINSEGMEDLSFDDAQDDNANKTLETQNLEDENLEQETTKEQT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH QEDIQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQVNISDFD HHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCC DLLVVEEQEKEMDFDDLPEDAEFLGQAKDNEESEEILEEFAPVVEDIQDEMDDFTSNLST CEEEEECHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDQIKEELDQLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCHHHHH LKESDIQEALREEILEKNEESIVSDATKDDSSEEIVNELSQSIAGAITSSIKDDTLKAAL HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGMNINININISFKED CCCEEEEEEEEEECCC >Mature Secondary Structure MKILLLNENPVVSRLVGLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKC CEEEEECCCHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH DRLIFLAPRNQNVDIDAQILQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADIS CCEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCEEECCEECCCCCCCEEEE LDLDNLNLDDLPDENSLDINSEGMEDLSFDDAQDDNANKTLETQNLEDENLEQETTKEQT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH QEDIQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQVNISDFD HHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCC DLLVVEEQEKEMDFDDLPEDAEFLGQAKDNEESEEILEEFAPVVEDIQDEMDDFTSNLST CEEEEECHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDQIKEELDQLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCHHHHH LKESDIQEALREEILEKNEESIVSDATKDDSSEEIVNELSQSIAGAITSSIKDDTLKAAL HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGMNINININISFKED CCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA