| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951119
Identifier: 153951119
GI number: 153951119
Start: 360270
End: 361502
Strand: Direct
Name: 153951119
Synonym: JJD26997_0407
Alternate gene names: NA
Gene position: 360270-361502 (Clockwise)
Preceding gene: 153952216
Following gene: 153952150
Centisome position: 19.53
GC content: 24.74
Gene sequence:
>1233_bases ATGCTCATAAACCAAACCTTTGAAATCGATTCTTGTGATGATGTAGAATTAAATATAAAAAGAACTAGCAAGCTTGAATA CCGCATCAGTTATGATGATGAAAAAGAGATTAAAGCTATAGTTTTTATAATTCCAGGATTTGGTGGTGATGCTGATGGGA ATTATAGAAAACATTTAGTCGAGTATGTTGCTAAAGAATTTCAAATTATGGTGGTTAGTGTAAATTATCATTGTATAAAA AATAGACTACAATTTGGCGCTAGTTTATTTATGGATAATATAGATAAATTTATTTTACAAGAAAATTGCACAGCTTTTAA TATAGCTATACCTATTCACTTAAATAAAATAACCGATATTTTATCTTACTTGGATGAAAATATGGAAAAATTAAAAAATG AAGAAAAAATTAAAGAAAATGCTAAAATGTCTTTGAGTATTACATTGGAACCTGGTAAGAATGAATATCAAAATTTTGGA GTTATGCAAGCGCAAGATTTAATTAATGCTTTATTACATTTAAAAAAAGAAAAATATAATTTATTGGAAAATATTCCAGT TATTATGATAGGAAGTTCCCATGGTGGTTACTTGGCTCATTTAGCCGCTAAAATAGCTCCTTGGCTTGTAGATGGAGTTA TAGATAACTCATCTTATGCTAAAACTCCTTTGCAATACTTAGGATTTGGCAAAGAGATTGATTATATGCGTCATTATGAA GCTTGTGATATTTCTAATTCTTTTAAAAATTTAAATTTATTATTTTATAGTAAAACATTTTGGACTTCAAATAAATTTCT AAAAAATTATTTTTCAAAAGATAAAAGCCTTGTAAGAGACATTTTAAATTATAAACATTTAAATATTATGTCTAATTACG ATATTTGTTTTATAAGTTATCATTCTATACAGGATGATTATATTGCACCTATTGGCGATAAAATACTTCTTTATGATTAT TTAAATAAATTAAATATTGATGCTGAATTGAATATTATTCGTCATAAGGAGCAAATTGATGGGAGATTTATTAAAAATCT AGAACATGGTATGGGAATGTCTATTAAATTTTTAATAAATAATAATTTACCTAAATTGTTTGCAAAAATACAATTAAAAA AAAGAATTGTTAGGCAAAAAACAGTTTCTTATCCTTGCCAAGATTTAATTTATACTTTTTATGAAGAAAATAATAAAATA AATTTAAAGATTGAGGAAAATATATGCTCATAA
Upstream 100 bases:
>100_bases ATTTTTCATAGCTAAGCCTTGTTTTTTGTGTTTTATTTTACTAAAATTTAAGTATAATTGTCTTTAAAATACAATAAAAT AATGCAAATAGGGTGGAATA
Downstream 100 bases:
>100_bases ACCAAACCTTTGAAATCGATTCTTGTGATGATGTAGAATTAAATATAAAAAGAACTAGTAAACTTGAATACCGCATCAGT TATGATGATGAAAAAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIIPGFGGDADGNYRKHLVEYVAKEFQIMVVSVNYHCIK NRLQFGASLFMDNIDKFILQENCTAFNIAIPIHLNKITDILSYLDENMEKLKNEEKIKENAKMSLSITLEPGKNEYQNFG VMQAQDLINALLHLKKEKYNLLENIPVIMIGSSHGGYLAHLAAKIAPWLVDGVIDNSSYAKTPLQYLGFGKEIDYMRHYE ACDISNSFKNLNLLFYSKTFWTSNKFLKNYFSKDKSLVRDILNYKHLNIMSNYDICFISYHSIQDDYIAPIGDKILLYDY LNKLNIDAELNIIRHKEQIDGRFIKNLEHGMGMSIKFLINNNLPKLFAKIQLKKRIVRQKTVSYPCQDLIYTFYEENNKI NLKIEENICS
Sequences:
>Translated_410_residues MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIIPGFGGDADGNYRKHLVEYVAKEFQIMVVSVNYHCIK NRLQFGASLFMDNIDKFILQENCTAFNIAIPIHLNKITDILSYLDENMEKLKNEEKIKENAKMSLSITLEPGKNEYQNFG VMQAQDLINALLHLKKEKYNLLENIPVIMIGSSHGGYLAHLAAKIAPWLVDGVIDNSSYAKTPLQYLGFGKEIDYMRHYE ACDISNSFKNLNLLFYSKTFWTSNKFLKNYFSKDKSLVRDILNYKHLNIMSNYDICFISYHSIQDDYIAPIGDKILLYDY LNKLNIDAELNIIRHKEQIDGRFIKNLEHGMGMSIKFLINNNLPKLFAKIQLKKRIVRQKTVSYPCQDLIYTFYEENNKI NLKIEENICS >Mature_410_residues MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIIPGFGGDADGNYRKHLVEYVAKEFQIMVVSVNYHCIK NRLQFGASLFMDNIDKFILQENCTAFNIAIPIHLNKITDILSYLDENMEKLKNEEKIKENAKMSLSITLEPGKNEYQNFG VMQAQDLINALLHLKKEKYNLLENIPVIMIGSSHGGYLAHLAAKIAPWLVDGVIDNSSYAKTPLQYLGFGKEIDYMRHYE ACDISNSFKNLNLLFYSKTFWTSNKFLKNYFSKDKSLVRDILNYKHLNIMSNYDICFISYHSIQDDYIAPIGDKILLYDY LNKLNIDAELNIIRHKEQIDGRFIKNLEHGMGMSIKFLINNNLPKLFAKIQLKKRIVRQKTVSYPCQDLIYTFYEENNKI NLKIEENICS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47760; Mature: 47760
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIIPGFGGDADGNYRKHLV CCCCCEECCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHH EYVAKEFQIMVVSVNYHCIKNRLQFGASLFMDNIDKFILQENCTAFNIAIPIHLNKITDI HHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHH LSYLDENMEKLKNEEKIKENAKMSLSITLEPGKNEYQNFGVMQAQDLINALLHLKKEKYN HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH LLENIPVIMIGSSHGGYLAHLAAKIAPWLVDGVIDNSSYAKTPLQYLGFGKEIDYMRHYE HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCHHHHHHC ACDISNSFKNLNLLFYSKTFWTSNKFLKNYFSKDKSLVRDILNYKHLNIMSNYDICFISY CCCCCCCCCCEEEEEEEEEHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEE HSIQDDYIAPIGDKILLYDYLNKLNIDAELNIIRHKEQIDGRFIKNLEHGMGMSIKFLIN ECCCCCCCCCCCCEEEHEEHHHHCCCCEEEEEEECHHHHCHHHHHHHHHCCCCEEEEEEE NNLPKLFAKIQLKKRIVRQKTVSYPCQDLIYTFYEENNKINLKIEENICS CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIIPGFGGDADGNYRKHLV CCCCCEECCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHH EYVAKEFQIMVVSVNYHCIKNRLQFGASLFMDNIDKFILQENCTAFNIAIPIHLNKITDI HHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHH LSYLDENMEKLKNEEKIKENAKMSLSITLEPGKNEYQNFGVMQAQDLINALLHLKKEKYN HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH LLENIPVIMIGSSHGGYLAHLAAKIAPWLVDGVIDNSSYAKTPLQYLGFGKEIDYMRHYE HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCCHHHHHHC ACDISNSFKNLNLLFYSKTFWTSNKFLKNYFSKDKSLVRDILNYKHLNIMSNYDICFISY CCCCCCCCCCEEEEEEEEEHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEE HSIQDDYIAPIGDKILLYDYLNKLNIDAELNIIRHKEQIDGRFIKNLEHGMGMSIKFLIN ECCCCCCCCCCCCEEEHEEHHHHCCCCEEEEEEECHHHHCHHHHHHHHHCCCCEEEEEEE NNLPKLFAKIQLKKRIVRQKTVSYPCQDLIYTFYEENNKINLKIEENICS CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA