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The map label for this gene is flgC [H]

Identifier: 153951079

GI number: 153951079

Start: 1245992

End: 1246486

Strand: Direct

Name: flgC [H]

Synonym: JJD26997_1403

Alternate gene names: 153951079

Gene position: 1245992-1246486 (Clockwise)

Preceding gene: 153951648

Following gene: 153951288

Centisome position: 67.53

GC content: 34.14

Gene sequence:

>495_bases
ATGGCATACTTAAGTGATTTTGATATTAGTGGTTATGGTTTAAGTGCTCAACGTTTTAGAATGAGTGTTATTAGCTCTAA
TATAGCTAATGTAAACACTACAAGAACAGCTGAAGGTGGGCCTTATAGAAGACGCGAAGTGATCTTTAAAGCAACAGATT
TTGATAAGCTTTTAAATGAGCAAATTAACAAAAATAATAATTTTTTAAAATATGAAAATCCTTTGAATGATCCAAGTTCG
CCAGAAGAAGCTAAACCCGCTATTCAAAGTGTTGTAGTGGATAAAGTGGTCAGAGATGACAAAGATTTTCGTATGAAGTA
TGATCCAAGCCATCCTGATGCAAATGCTGAAGGTTATGTAGCGTATCCAAATGTAAACCCTGTTATTGAAATGGCTGATT
TGATTGAAGCTACAAGAGCTTATCAAGCGAATGTAAGTGCTTTTACAAGTGCAAAAACTATAGCTCAAAGTGCGATTGAT
CTATTAAGAGGATAA

Upstream 100 bases:

>100_bases
TACAGTTATGATAACAGCTCTTGATGGAGTTTTAAGAAGACAAAGCAATATCTTTAGTTCTATACTTGATGCAAGCTCTA
AATTAAGTTAAAGGTAAATT

Downstream 100 bases:

>100_bases
TAAAAAATGAACAATATTAATGATTTAAGATTAAATAATATTTCAAATACCAACAAAAGTCAAAATTCTACAGGAATTGG
TAATGAATTTGCCAAGATGC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNEQINKNNNFLKYENPLNDPSS
PEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
LLRG

Sequences:

>Translated_164_residues
MAYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNEQINKNNNFLKYENPLNDPSS
PEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
LLRG
>Mature_163_residues
AYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNEQINKNNNFLKYENPLNDPSSP
EEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDL
LRG

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=161, Percent_Identity=31.6770186335404, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 18303; Mature: 18171

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
QINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEE
AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLRG
ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYLSDFDISGYGLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKATDFDKLLNE
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
QINKNNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEE
AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLRG
ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]