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The map label for this gene is mcpB [H]

Identifier: 153951071

GI number: 153951071

Start: 1514444

End: 1516438

Strand: Direct

Name: mcpB [H]

Synonym: JJD26997_1720

Alternate gene names: 153951071

Gene position: 1514444-1516438 (Clockwise)

Preceding gene: 153951788

Following gene: 153951908

Centisome position: 82.08

GC content: 31.48

Gene sequence:

>1995_bases
ATGCAATCAATAAATTCAGGCAAATCCATTGGAATTTCAGCTAAGCTTACGCTATGGGTTGGAATTTCAGTTGTATTAAT
TTTAGCAATCACAAGTGCTGTTAGTTACTTTGATTCGAGAAATAACACATATGGATTGCTAAAAGACAATCAGTTAAAAA
CTATGCAAGATGTGGGTGCTTTTTTTGAAAGCTATGGTATGTCAAAAAGAAATGGTATTCAAATACTAGCCAATGAGCTT
AATAAACGTCCTGATATGAGCGATGAAGAGCTAATCAATCTTATCAAAGCATTTAAAAAAGTTAATGGCTATGATCTAGT
TTATGTAGGATTTGATAATACAGGAAAAAATTATGAATCTGATGATCAAATTTTAGATCTATCAAAAGGTTTTGATACTA
AAAATCGTCCTTGGTATAAAGCTGCCAAAGAAGCAAAAAAGCTTATAGTAACAAAACCTTATAAATCCGCCAATAGTGGA
AAGGTTGGTTTAACTTACGCTGCTCCATTTTATGATAGAAATGGAAATTTTAGAGGTGTTGTAGGTGGAGATTATGATCT
AGCAAAATTTTCAACCGATGTGTTAGCTGTGGGTGAATCACATAATACCTATACCGTAGTGCTTGATCCAGAAGGAACAA
TACTTTTTACAGGCGATATTACTAAAATCCTAACAAAAACAGAATTAAGTATCAATATCGCCAATGCAATCAAAGCAAAT
CCTGCTCTTATTGATCCAAAAACAGATACTTTATTTACTGCTAAAGATCACCAAGGTATAGATTATGCGATTATGTGTAA
TTCTACTTTTAATCCTTTATTTAGAATTTGTACAGTAACAGAAAACAAAGTTTATACCGAAGCTGTTAATTCTATTTTAA
TGAAACAAGTTATAGTCGGTATTATAGCTATAATCATAGCTTTAATATTGATTAGATTTTTAATCAGCAGAAGTCTCTCC
CCACTTGCAGCTATCCAAACAGGTTTAACTTCATTCTTTGATTTCATCAATCATAAAACAAAAAACATCACAGCTATTAA
TATAAAGAGTAAAGATGAATTCGGTCAAATGGCTAATGCTATCAACGAAAACATCCTTGCTACTAAAAAAGGTTTAGAAC
AAGACAATCAAGCCGTTAAAGAATCAGTTCAAACTGTATCAGTTGTAGAAGGTGGTAATTTAACAGCAAGAATTACTGCT
AATCCAAGAAACCCACAACTGATTGAACTTAAAAATGTTCTAAATAAACTTCTTGATGTTTTACAAGCTAGAGTAGGTTC
TGATATGAATGTTATTCATAAAATTTTTGAAGAATACAAAAGCTTAGACTTTAGAAATAAAATTGCTAATGCTTCAGGAA
ATGTAGAATTAACTACCAATGCTTTAGGACAAGAAATCATTAAAATGCTAAAACAAAGTTCAGACTTTGCTAATGCTTTA
GCTAATGAAAGTGGAAAATTACAAACTGCTGTTCAAAGCTTAACCACTTCTTCAAATTCTCAAGCTCAATCTTTAGAAGA
AACTGCAGCAGCTTTAGAAGAGATTACTTCTTCTATGCAAAATGTTTCAGTTAAGACTAGTGATGTTATCACTCAATCTG
AAGAGATTAAAAATGTTACAGGTATTATAGGAGATATTGCAGATCAAATCAATCTTCTAGCTTTAAATGCTGCTATTGAA
GCTGCACGTGCTGGAGAACATGGTAGAGGCTTTGCGGTTGTGGCTGATGAAGTTAGAAAACTAGCTGAAAGAACTCAAAA
GTCTTTATCTGAAATTGAAGCTAATACTAATTTACTTGTTCAATCTATCAATGATATGGCAGAAAGTATTAAAGAACAAA
CTGCAGGTATTACTCAAATCAATGATAGTGTAGCTCAAATTGATCAAACTACTAAAGATAATGTTGAAATTGCTAATGAA
TCAGCTATTATTTCTAGTACAGTAAGTGATATAGCTAATAATATCTTAGAAGATGTTAAGAAGAAGAGGTTTTAA

Upstream 100 bases:

>100_bases
GATTTTTTATGTAAAAAGTTCATTTTTTATACACTTTTTCTCTTATTTTTTGCTAGAATAATATTTTTATTTCATTTTCA
ATATAAATATAGGAGTTATA

Downstream 100 bases:

>100_bases
TTAATCATTCAAGCCCAAAAAAGGGCTTGAATTTTAAAAATTTACGCTATGATTTTATATATTTTATCAAGGAAAATATA
TGAATTTATGGGATAAAAAG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MQSINSGKSIGISAKLTLWVGISVVLILAITSAVSYFDSRNNTYGLLKDNQLKTMQDVGAFFESYGMSKRNGIQILANEL
NKRPDMSDEELINLIKAFKKVNGYDLVYVGFDNTGKNYESDDQILDLSKGFDTKNRPWYKAAKEAKKLIVTKPYKSANSG
KVGLTYAAPFYDRNGNFRGVVGGDYDLAKFSTDVLAVGESHNTYTVVLDPEGTILFTGDITKILTKTELSINIANAIKAN
PALIDPKTDTLFTAKDHQGIDYAIMCNSTFNPLFRICTVTENKVYTEAVNSILMKQVIVGIIAIIIALILIRFLISRSLS
PLAAIQTGLTSFFDFINHKTKNITAINIKSKDEFGQMANAINENILATKKGLEQDNQAVKESVQTVSVVEGGNLTARITA
NPRNPQLIELKNVLNKLLDVLQARVGSDMNVIHKIFEEYKSLDFRNKIANASGNVELTTNALGQEIIKMLKQSSDFANAL
ANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIE
AARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANE
SAIISSTVSDIANNILEDVKKKRF

Sequences:

>Translated_664_residues
MQSINSGKSIGISAKLTLWVGISVVLILAITSAVSYFDSRNNTYGLLKDNQLKTMQDVGAFFESYGMSKRNGIQILANEL
NKRPDMSDEELINLIKAFKKVNGYDLVYVGFDNTGKNYESDDQILDLSKGFDTKNRPWYKAAKEAKKLIVTKPYKSANSG
KVGLTYAAPFYDRNGNFRGVVGGDYDLAKFSTDVLAVGESHNTYTVVLDPEGTILFTGDITKILTKTELSINIANAIKAN
PALIDPKTDTLFTAKDHQGIDYAIMCNSTFNPLFRICTVTENKVYTEAVNSILMKQVIVGIIAIIIALILIRFLISRSLS
PLAAIQTGLTSFFDFINHKTKNITAINIKSKDEFGQMANAINENILATKKGLEQDNQAVKESVQTVSVVEGGNLTARITA
NPRNPQLIELKNVLNKLLDVLQARVGSDMNVIHKIFEEYKSLDFRNKIANASGNVELTTNALGQEIIKMLKQSSDFANAL
ANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIE
AARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANE
SAIISSTVSDIANNILEDVKKKRF
>Mature_664_residues
MQSINSGKSIGISAKLTLWVGISVVLILAITSAVSYFDSRNNTYGLLKDNQLKTMQDVGAFFESYGMSKRNGIQILANEL
NKRPDMSDEELINLIKAFKKVNGYDLVYVGFDNTGKNYESDDQILDLSKGFDTKNRPWYKAAKEAKKLIVTKPYKSANSG
KVGLTYAAPFYDRNGNFRGVVGGDYDLAKFSTDVLAVGESHNTYTVVLDPEGTILFTGDITKILTKTELSINIANAIKAN
PALIDPKTDTLFTAKDHQGIDYAIMCNSTFNPLFRICTVTENKVYTEAVNSILMKQVIVGIIAIIIALILIRFLISRSLS
PLAAIQTGLTSFFDFINHKTKNITAINIKSKDEFGQMANAINENILATKKGLEQDNQAVKESVQTVSVVEGGNLTARITA
NPRNPQLIELKNVLNKLLDVLQARVGSDMNVIHKIFEEYKSLDFRNKIANASGNVELTTNALGQEIIKMLKQSSDFANAL
ANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIE
AARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANE
SAIISSTVSDIANNILEDVKKKRF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=271, Percent_Identity=28.4132841328413, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI2367378, Length=277, Percent_Identity=28.5198555956679, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1788194, Length=218, Percent_Identity=33.0275229357798, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788195, Length=200, Percent_Identity=33, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789453, Length=210, Percent_Identity=31.4285714285714, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72484; Mature: 72484

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSINSGKSIGISAKLTLWVGISVVLILAITSAVSYFDSRNNTYGLLKDNQLKTMQDVGA
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
FFESYGMSKRNGIQILANELNKRPDMSDEELINLIKAFKKVNGYDLVYVGFDNTGKNYES
HHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
DDQILDLSKGFDTKNRPWYKAAKEAKKLIVTKPYKSANSGKVGLTYAAPFYDRNGNFRGV
CCCEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCEECCCCCEEEE
VGGDYDLAKFSTDVLAVGESHNTYTVVLDPEGTILFTGDITKILTKTELSINIANAIKAN
ECCCCHHHHHCCCEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHEEEEEHHHHCCC
PALIDPKTDTLFTAKDHQGIDYAIMCNSTFNPLFRICTVTENKVYTEAVNSILMKQVIVG
CCEECCCCCCEEEECCCCCCEEEEEECCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHH
IIAIIIALILIRFLISRSLSPLAAIQTGLTSFFDFINHKTKNITAINIKSKDEFGQMANA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
INENILATKKGLEQDNQAVKESVQTVSVVEGGNLTARITANPRNPQLIELKNVLNKLLDV
HHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCEEEEEEECCCCCCEEHHHHHHHHHHHH
LQARVGSDMNVIHKIFEEYKSLDFRNKIANASGNVELTTNALGQEIIKMLKQSSDFANAL
HHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHH
ANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVT
HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLV
HHHHHHHHHHHHEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QSINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANESAIISSTVSDIANNILEDVK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
KKRF
HCCC
>Mature Secondary Structure
MQSINSGKSIGISAKLTLWVGISVVLILAITSAVSYFDSRNNTYGLLKDNQLKTMQDVGA
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
FFESYGMSKRNGIQILANELNKRPDMSDEELINLIKAFKKVNGYDLVYVGFDNTGKNYES
HHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
DDQILDLSKGFDTKNRPWYKAAKEAKKLIVTKPYKSANSGKVGLTYAAPFYDRNGNFRGV
CCCEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCEECCCCCEEEE
VGGDYDLAKFSTDVLAVGESHNTYTVVLDPEGTILFTGDITKILTKTELSINIANAIKAN
ECCCCHHHHHCCCEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHEEEEEHHHHCCC
PALIDPKTDTLFTAKDHQGIDYAIMCNSTFNPLFRICTVTENKVYTEAVNSILMKQVIVG
CCEECCCCCCEEEECCCCCCEEEEEECCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHH
IIAIIIALILIRFLISRSLSPLAAIQTGLTSFFDFINHKTKNITAINIKSKDEFGQMANA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
INENILATKKGLEQDNQAVKESVQTVSVVEGGNLTARITANPRNPQLIELKNVLNKLLDV
HHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCEEEEEEECCCCCCEEHHHHHHHHHHHH
LQARVGSDMNVIHKIFEEYKSLDFRNKIANASGNVELTTNALGQEIIKMLKQSSDFANAL
HHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHH
ANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVT
HCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLV
HHHHHHHHHHHHEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QSINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANESAIISSTVSDIANNILEDVK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
KKRF
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]