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The map label for this gene is ybgC [C]

Identifier: 153951051

GI number: 153951051

Start: 736990

End: 737364

Strand: Direct

Name: ybgC [C]

Synonym: JJD26997_0817

Alternate gene names: 153951051

Gene position: 736990-737364 (Clockwise)

Preceding gene: 153951943

Following gene: 153951017

Centisome position: 39.94

GC content: 25.6

Gene sequence:

>375_bases
ATGAAAATGCGTATATATTATGAAGATACTGATGCGGGTGGAGTGGTGTATCATAGTAATTATTTAAAATTTTGCGAGAG
AGCAAGAAGTGAAATTTTTTTTAATAAAAAAGTAGATATTTTTGATGCATCTAAGGGACATTTTTTGCTTGCAAAAGCAA
ATTGCAATTTCTTAAAACCTGCAAAACTTGGAGATATGATAGAGATTAAAACAAAAATTTTAAAAGTTAAAAATGCTTCT
GTGGAAATTTTGCAAGAAATTTATAAAGATGAAATTTTACTTTTTAAAATGGAATTAACTTTAGCTTTTATTAAAAACGA
AAAACCAGCTAGAATGGATATGCAGTTAAAAAAGCTTTTTGAAGAATTATTTTAA

Upstream 100 bases:

>100_bases
TAAGCATTCATTTATTTTCCTTATATGCCTTGATTTATATGAAGTATCATTGTATAATTTTAAAATTAAAATATAATTAT
TTTTAAGGGAAATATTAATC

Downstream 100 bases:

>100_bases
TTCTTCAAAGCTTGCTTGTTTGCCTTGCATAAGACGCACTTTGTAATCAACTTGAGAATTTTTGATTTTCTCATCAAATA
AACTTTCGCTTTTTTTATTT

Product: thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKMRIYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASKGHFLLAKANCNFLKPAKLGDMIEIKTKILKVKNAS
VEILQEIYKDEILLFKMELTLAFIKNEKPARMDMQLKKLFEELF

Sequences:

>Translated_124_residues
MKMRIYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASKGHFLLAKANCNFLKPAKLGDMIEIKTKILKVKNAS
VEILQEIYKDEILLFKMELTLAFIKNEKPARMDMQLKKLFEELF
>Mature_124_residues
MKMRIYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASKGHFLLAKANCNFLKPAKLGDMIEIKTKILKVKNAS
VEILQEIYKDEILLFKMELTLAFIKNEKPARMDMQLKKLFEELF

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=93, Percent_Identity=40.8602150537634, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14597; Mature: 14597

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRIYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASKGHFLLAKANCNFLKP
CEEEEEEECCCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEEECCCCEECC
AKLGDMIEIKTKILKVKNASVEILQEIYKDEILLFKMELTLAFIKNEKPARMDMQLKKLF
CCCCCHHHHHHHHHEECCCHHHHHHHHHHCCEEEEEHHEEEEEECCCCCCCCCHHHHHHH
EELF
HHHC
>Mature Secondary Structure
MKMRIYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASKGHFLLAKANCNFLKP
CEEEEEEECCCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEEECCCCEECC
AKLGDMIEIKTKILKVKNASVEILQEIYKDEILLFKMELTLAFIKNEKPARMDMQLKKLF
CCCCCHHHHHHHHHEECCCHHHHHHHHHHCCEEEEEHHEEEEEECCCCCCCCCHHHHHHH
EELF
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]