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The map label for this gene is yqiI [H]

Identifier: 153951049

GI number: 153951049

Start: 401964

End: 403943

Strand: Direct

Name: yqiI [H]

Synonym: JJD26997_0456

Alternate gene names: 153951049

Gene position: 401964-403943 (Clockwise)

Preceding gene: 153951979

Following gene: 153951661

Centisome position: 21.79

GC content: 29.49

Gene sequence:

>1980_bases
ATGGCTAAAATTTTTGTATTTTTAGTATTTGTTTTCACAACTCTTTTTGGAGCTTATGAAAATGAGCTTGCAAATTTCGA
TAAAAATTTTATTGGCTCTAAAAGCGAAGTGCAAGTAAAATTTCATCATCAACTGAAAAGCCTTTATATACAAAGTATTA
TCAATGAAGATGAAAAAACTAAAATGGAAATTTTAAAAAGATTGATCATCAGTTCAAATACTTTAAATTTAGATGACAAG
TCATATGCTAATGAGTTAAAAGAAAGTGGTATAAGTGAAGCAAGTATCAATGCTTTAAGAAAGGCTGTTATTAAAGATAT
TAAGGTTCAAAATATTTCTCAAGACACTGAAAAATCAACTTTTGAACCTATAAAAACAGTTCAAAAAAATGAAAAAAAAT
CATCCAACGAACAGGTAAAAAATACAGAAAAAACAAATTCTAAAACTTCACAAGCGCCAAAGAGTAGTATCGCTTCTAAA
GCAAAAAGCGATGATAAAATTTATGTTTTAAAATCAAGTAAAACAAACCAAGGCGTAGAGTTTGAACTAAATGCAGATTT
GGATAAGGATCAATTAAAAAGTTTTGCGTTAGATGAAAAAGGAAACTATCGTTTTATTAGTGATTTTGATGGGGTTTTAG
AAGGGGGTAAAAAAGAGTTTAAATTTGATGACTATCGTTTAGTGATTTCACAATTTAATCCCAAAACCATACGCATAGTG
GTTTATGCTAAAGAAAAAATTCCTATTGATATATCTTTTAAAGAAGAAAAATTAATTTTTTCAAAAGAAACTGTTAATCA
AAAAAAGACTGAGCAAGATAGTAAAATTTCAGAGAAAAAGCAAGATCAAAAAACAGAAATTAAAACCAAAGTTTTAGAAA
CAAAAAAACAAGATAAAAAAACCAATAACGAAAAAGAAAATCAAGAGCCTTTATATGTTTTAGATGTGGATAAAATTTCT
AATGCCGTGGTATTAAATTTAAGTGATGATTTAGATGAAAAAGAAATAGCAGTGTTTGATACCAAAGATCAAAAATTCCG
ATATGTTGTAAGTTTTAAGGGTGTGTTAGAAGGTAATAGAAAAAGCTTTACTTTTGGACAAAATGTGATTACAGTTACTC
AGTATAATCCAAAAACTGTTCGTGTGGTTTTGAGTGCTCCTAAAGAATTTAAACTTTTAAAGGAGTTGGATAATAAAAAT
CTCACTTTAGGTTTTTATACGCAAACTACAAATCAAAATGTAAACAAAAAAGCAACCCAAAGTTCTAGTAAAACTTTAAA
TACAAATTATAAATCAGGAAAGCTTGTGGTTATCGATGCAGGGCATGGTGGAAAAGATAGCGGTGCTTTAAGTGATAAAA
AAGGAAGTTTAAAAGAAAAAGATATAGTTTTAAGCACGGCTTTAAAACTTGGAAATGAACTTAAAAAACGCGGTTATAAA
GTGCTTTATACTAGAAGTTCGGATAAATTTATCAATCTTCGTGATAGGACCAAATATGCTAATGATAAAAGAGCGGATTT
GTTTATTTCTATACATACTAATGCAGCACCAAATGCCACAAAGGCCAAAAGTAGCGAAGGCGTGGAAACTTTCTTTTTAA
GTCCTGCAAGAAGTGAAAGAAGTAAAAAGGCAGCAGAAAAAGAAAATCAAGGGGATTTTGAAGAGATTAATTATTTCTCA
AAACAAAGTATTTTAAATTTCTTAAATCGTGAAAAAATCGTTGCTTCGAATAAACTAGCCATTGATGTGCAAAAAAATAT
ACTCACTCAAACACGCAAAAAGTATAAAATTGTCGATGGAGGAGTAAGAGAAGCACCTTTTTGGGTTTTAGTAGGTGCGC
AAATGCCTGCAATTTTGATTGAAATTGGCTATATCACACATCCAAATGAAGGTAAAAGAATCTCCAATAAAGCTTTTCAA
GATTTATTGGTTAAGGGCATTGCCGATGGAGTTGAGAGTTATTTTTATAACAACCGATGA

Upstream 100 bases:

>100_bases
AAAAAGAAACAGGACTTTTCTTTACAGGTGCAAATGGATATCGTTTAGATAAACTTATCAGTGTTAAAGAACTTATGGAA
AAATTGGTTAATGGTGAATA

Downstream 100 bases:

>100_bases
AAAAAGCTAAGCTAATCTTTAAGGACAACACTCCTTTTTCTTTGGATTTTGATGATTTTTATTTTAATTCCAAAGATGGT
TTAAATGAAAGCAAATTTGT

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MAKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQLKSLYIQSIINEDEKTKMEILKRLIISSNTLNLDDK
SYANELKESGISEASINALRKAVIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQVKNTEKTNSKTSQAPKSSIASK
AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKKEFKFDDYRLVISQFNPKTIRIV
VYAKEKIPIDISFKEEKLIFSKETVNQKKTEQDSKISEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKIS
NAVVLNLSDDLDEKEIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKLLKELDNKN
LTLGFYTQTTNQNVNKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKRGYK
VLYTRSSDKFINLRDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFS
KQSILNFLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQ
DLLVKGIADGVESYFYNNR

Sequences:

>Translated_659_residues
MAKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQLKSLYIQSIINEDEKTKMEILKRLIISSNTLNLDDK
SYANELKESGISEASINALRKAVIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQVKNTEKTNSKTSQAPKSSIASK
AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKKEFKFDDYRLVISQFNPKTIRIV
VYAKEKIPIDISFKEEKLIFSKETVNQKKTEQDSKISEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKIS
NAVVLNLSDDLDEKEIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKLLKELDNKN
LTLGFYTQTTNQNVNKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKRGYK
VLYTRSSDKFINLRDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFS
KQSILNFLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQ
DLLVKGIADGVESYFYNNR
>Mature_658_residues
AKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQLKSLYIQSIINEDEKTKMEILKRLIISSNTLNLDDKS
YANELKESGISEASINALRKAVIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQVKNTEKTNSKTSQAPKSSIASKA
KSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKKEFKFDDYRLVISQFNPKTIRIVV
YAKEKIPIDISFKEEKLIFSKETVNQKKTEQDSKISEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKISN
AVVLNLSDDLDEKEIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKLLKELDNKNL
TLGFYTQTTNQNVNKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKRGYKV
LYTRSSDKFINLRDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSK
QSILNFLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQD
LLVKGIADGVESYFYNNR

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788776, Length=284, Percent_Identity=30.9859154929577, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI87082163, Length=318, Percent_Identity=27.9874213836478, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1790611, Length=234, Percent_Identity=28.2051282051282, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 74800; Mature: 74669

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQLKSLYIQSIINEDEKT
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHH
KMEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKAVIKDIKVQNISQDTEKST
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FEPIKTVQKNEKKSSNEQVKNTEKTNSKTSQAPKSSIASKAKSDDKIYVLKSSKTNQGVE
HHHHHHHHHHHCCCCHHHHHCCHHCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEE
FELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKKEFKFDDYRLVISQFNPKTIRIV
EEECCCCCHHHHHHHCCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE
VYAKEKIPIDISFKEEKLIFSKETVNQKKTEQDSKISEKKQDQKTEIKTKVLETKKQDKK
EEECCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEKEIAVFDTKDQKFRYVVSFKGVLEGNR
CCCCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEECCCC
KSFTFGQNVITVTQYNPKTVRVVLSAPKEFKLLKELDNKNLTLGFYTQTTNQNVNKKATQ
CEEEECCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHC
SSSKTLNTNYKSGKLVVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKRGYK
CCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
VLYTRSSDKFINLRDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSER
EEEEECCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHH
SKKAAEKENQGDFEEINYFSKQSILNFLNREKIVASNKLAIDVQKNILTQTRKKYKIVDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEHHHHHHHHHHHEEEECC
GVREAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQDLLVKGIADGVESYFYNNR
CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQLKSLYIQSIINEDEKT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHH
KMEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKAVIKDIKVQNISQDTEKST
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FEPIKTVQKNEKKSSNEQVKNTEKTNSKTSQAPKSSIASKAKSDDKIYVLKSSKTNQGVE
HHHHHHHHHHHCCCCHHHHHCCHHCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEE
FELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKKEFKFDDYRLVISQFNPKTIRIV
EEECCCCCHHHHHHHCCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCCEEEEE
VYAKEKIPIDISFKEEKLIFSKETVNQKKTEQDSKISEKKQDQKTEIKTKVLETKKQDKK
EEECCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEKEIAVFDTKDQKFRYVVSFKGVLEGNR
CCCCCCCCCCEEEEEHHHCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEECCCC
KSFTFGQNVITVTQYNPKTVRVVLSAPKEFKLLKELDNKNLTLGFYTQTTNQNVNKKATQ
CEEEECCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHC
SSSKTLNTNYKSGKLVVIDAGHGGKDSGALSDKKGSLKEKDIVLSTALKLGNELKKRGYK
CCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
VLYTRSSDKFINLRDRTKYANDKRADLFISIHTNAAPNATKAKSSEGVETFFLSPARSER
EEEEECCCCEEEEHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHH
SKKAAEKENQGDFEEINYFSKQSILNFLNREKIVASNKLAIDVQKNILTQTRKKYKIVDG
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEHHHHHHHHHHHEEEECC
GVREAPFWVLVGAQMPAILIEIGYITHPNEGKRISNKAFQDLLVKGIADGVESYFYNNR
CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]