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The map label for this gene is ssb [H]

Identifier: 153950985

GI number: 153950985

Start: 763349

End: 763777

Strand: Direct

Name: ssb [H]

Synonym: JJD26997_0848

Alternate gene names: 153950985

Gene position: 763349-763777 (Clockwise)

Preceding gene: 153952432

Following gene: 153952606

Centisome position: 41.37

GC content: 31.47

Gene sequence:

>429_bases
ATGTTCAATCAAATTACAGTTATAGGTAATATTTGCCAAGATATTAAGTTGAGCTATACTCAAAGTGGCGTAGCTTTTCT
AAATAATGCTATTGCTAGTAGTTACAAATATACTACTAATGATGGCACAATCAAAGAAGAAGTTTGCTACTTGAACTTTA
GTGTCTTTGGTAGATTAGCCGAAAACATGAATCAATACTTGCACAAAGGTTCAAAAATCTTTTTACAAGGAAGAATGGTT
CAAGAAAATTATGTAGATAGAGAAGGGAAAAACAGAACAAACTATAAGATTGCTGTTGAAACTATGAAGTTTTTAGATAG
CAAACCTGCTGATAATAATCAATCAGGTAATTCTTATAAAAATGTTCAAGAAACTTCTACTCCTGAAGCTAGTCAGCCTG
TACAGCAAGGAGAGAATTTTCCTTTTTAA

Upstream 100 bases:

>100_bases
TTTTGTTTTATAAAAGCAAAAAGAATATCCCTATTTGGGGCGTGTTCTCTTTTGTTTTTATAAGACAAATGTCTTAAATA
AATTTTTTAAAGGAGAACAC

Downstream 100 bases:

>100_bases
TCAGCCCTAGGTGGGATAGTTTTATCCCACTAGGGATACTTCTATCCCTTGACTTCTAACATTTTTTATGTTATAAGATA
AGGAGAAAAAATGAAAGATT

Product: single-strand binding protein family

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MFNQITVIGNICQDIKLSYTQSGVAFLNNAIASSYKYTTNDGTIKEEVCYLNFSVFGRLAENMNQYLHKGSKIFLQGRMV
QENYVDREGKNRTNYKIAVETMKFLDSKPADNNQSGNSYKNVQETSTPEASQPVQQGENFPF

Sequences:

>Translated_142_residues
MFNQITVIGNICQDIKLSYTQSGVAFLNNAIASSYKYTTNDGTIKEEVCYLNFSVFGRLAENMNQYLHKGSKIFLQGRMV
QENYVDREGKNRTNYKIAVETMKFLDSKPADNNQSGNSYKNVQETSTPEASQPVQQGENFPF
>Mature_142_residues
MFNQITVIGNICQDIKLSYTQSGVAFLNNAIASSYKYTTNDGTIKEEVCYLNFSVFGRLAENMNQYLHKGSKIFLQGRMV
QENYVDREGKNRTNYKIAVETMKFLDSKPADNNQSGNSYKNVQETSTPEASQPVQQGENFPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=110, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16105; Mature: 16105

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNQITVIGNICQDIKLSYTQSGVAFLNNAIASSYKYTTNDGTIKEEVCYLNFSVFGRLA
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCCEEHHHEEHHHHHHHHHH
ENMNQYLHKGSKIFLQGRMVQENYVDREGKNRTNYKIAVETMKFLDSKPADNNQSGNSYK
HHHHHHHHCCCEEEEECEEHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC
NVQETSTPEASQPVQQGENFPF
CCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MFNQITVIGNICQDIKLSYTQSGVAFLNNAIASSYKYTTNDGTIKEEVCYLNFSVFGRLA
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCCEEHHHEEHHHHHHHHHH
ENMNQYLHKGSKIFLQGRMVQENYVDREGKNRTNYKIAVETMKFLDSKPADNNQSGNSYK
HHHHHHHHCCCEEEEECEEHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC
NVQETSTPEASQPVQQGENFPF
CCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]