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The map label for this gene is 153950976

Identifier: 153950976

GI number: 153950976

Start: 733300

End: 733827

Strand: Direct

Name: 153950976

Synonym: JJD26997_0811

Alternate gene names: NA

Gene position: 733300-733827 (Clockwise)

Preceding gene: 153951709

Following gene: 153951943

Centisome position: 39.74

GC content: 26.89

Gene sequence:

>528_bases
ATGAGAATAAATTATAAAAAATTATTTAATCTAAGAAAATTATTAAGCGATCCAAAAAAACTTTTTTCTGTATTAATCTT
CACTCTTGTAGTTGTTTTTATCCAAAACTATATTGCCCAAAATTCTAGTTTTGAAGGAAAAGTAGTTAGAGTTATTGATG
GAGATACTATAGAAGTTAATCATGAAAACAAACTCGCTAGAATAAGGTTTTTTGGTATAGATGCACCAGAACTTAAACAA
AGTTTTGGAAAGCAATCAAAAGAAGCTTTAAGTAGAATTTTAAGTGGCAAACAAGTTGAAATTATTTATAAAAATAAAGA
TACTTATGGTAGAATTGTCGCTATTGTAAAGCTTAATGATGTTGATATTAATCGATTTTTAGTAAGCAAAGGCTATGCTT
GGGCTGATACTTACTATAGTAACGCTTATATTAAAGAACAAGAAAATGCTAAGAAAAATCATTTAGGTCTTTGGAAAGAG
AGTAATCCTATAGAGCCTTATAAATGGAGAAAACATAATAAATTCTAA

Upstream 100 bases:

>100_bases
TAATTGTTTAAAATTTTCTATAACATTTTGCATTTTATCTCCTTTGTTTTGATAAAATTATGGCATATTTTTTAAAATTT
AAAGGCGAAATGATTAAAAA

Downstream 100 bases:

>100_bases
GGAAAAACATGAAAAAATATACCTTAATGATACTATTAGCTTTAGGAATTTCTGGATGTTTTGTAAATGAAAGAGGGATT
TCAAATCGTTTTTATGATGA

Product: thermonuclease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRVIDGDTIEVNHENKLARIRFFGIDAPELKQ
SFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKE
SNPIEPYKWRKHNKF

Sequences:

>Translated_175_residues
MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRVIDGDTIEVNHENKLARIRFFGIDAPELKQ
SFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKE
SNPIEPYKWRKHNKF
>Mature_175_residues
MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRVIDGDTIEVNHENKLARIRFFGIDAPELKQ
SFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKE
SNPIEPYKWRKHNKF

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 20507; Mature: 20507

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRVIDGDTIEVN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEC
HENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIVKLND
CCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECC
VDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKESNPIEPYKWRKHNKF
CCHHHHHHHCCCEEEHHHCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFEGKVVRVIDGDTIEVN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEC
HENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEIIYKNKDTYGRIVAIVKLND
CCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECC
VDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKESNPIEPYKWRKHNKF
CCHHHHHHHCCCEEEHHHCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]