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The map label for this gene is ybjZ [C]

Identifier: 153950945

GI number: 153950945

Start: 1782401

End: 1783690

Strand: Direct

Name: ybjZ [C]

Synonym: JJD26997_2021

Alternate gene names: 153950945

Gene position: 1782401-1783690 (Clockwise)

Preceding gene: 153951946

Following gene: 153952654

Centisome position: 96.6

GC content: 32.71

Gene sequence:

>1290_bases
ATGTTGGCTAAAATGATTTTTAACTCTATATTTAAAAACAAAATTCAAAAATTTTTAGCCTTTCTTACTTGTTTTTTAGC
CACACTTTTACTCTCTACTATGCTAAATATCACCCTAAGTATAGGCGATGAAGTAACTAAACAACTCAAAAGCTATGGCT
CTAATATCCTTGTTTTACCCAAAGGCTCAAGTCTTGGTATAGAAATAGGCAATGAACTTTATGAACCCTTAAAAAACAAA
AACTACCTAGAAGAAAAAAATTTATATATGATTAAAGACATTTATTGGCGTAACAACATCACCGCACTTGCTCCCTTTTT
AGAAGGTAAAATCACAATTGAAAACTCGCAGCAAAAAGCACTTATTTATGGTACTTATTTTCAAAAAGCCATAAAAATTA
AAGATGATGATGATTTTATCACAGGTATAAAAAGTCTTTATCCTTATTTAGCAGTGCAAGGAGAATGGGCAAAAGATGAT
AGCAATGAAATCATGCTAGGCGAAGACTTTGCTAAAAACAATAAATTAAAATTAGGAGATACTATCAAACTCATAGGAGA
AAACAATCAAAGCAAAGAAGCAAAAATCGTAGGCATTTTACTTCATGCTAATCCTAAAATGTCAAATAAAATCATCGCTC
CTTTAAATTTAGCTCAAGATTTACTCAACAAACAAGGGCTTTACTCAAGTGCAGAAGTAAGAGCTTTTACCATACCTGAA
TCAGCCCTTTCTGAAAAAGTGCGTCGCTTAGGAGAAGAAAAATTAGATCAGTTAGAATATGACAAATGGTATTGCTCAGC
CTATGTAGGCTCAATCGCTAGTCAAATTAGCGATGGCTTACCAGGTGCTGATGCAAAAGCTCTAAATGCTATAAGCGATG
CTCAAAGCTTGGTGGTTAAAAAGATCCAATCCTTAATGGGCATTACTTGCATTATTTGTCTTATTGTTGCAAGTATTGCG
ATTTCAAGTCTGATGAGTTCTGAAATTCATCGTAGAAAAAAAGAAATAGGACTTTTAAAAGTACTTGGTGCTAATACTTT
TCAAATTTATCTCATCTTTGCTAGCGAAAATTTAATCGTAGCTTTATTTGCTGCTTTATTTGGCTTTATTTTTGGCACAG
CACTTTCTCAAATCATCAGTCTTAGTATTTTTGGATATTTTATTGATATAGCCTTTATAGCTTTACCTTTAAGCTTTATT
TTTGCAGGACTTATTGCCTTGCTAGGTTGCTTGCTTCCTATAAAAAATATCACACAACTTTCAGCTGCAGGAGTGCTTTA
TGGTAGATAA

Upstream 100 bases:

>100_bases
TATTATTTTTCAAATCAAAACAACTATGAAGAATTTAAAAAAGATCCTATGAAATATGTAGAAGAAAACGAAGCCCAATT
TTTAATCCAAAGGAGAAATG

Downstream 100 bases:

>100_bases
GTTTTTCCTCAATGAACTTTTTAAAAGCATTAGCTTTTCTTATCAAAGATTTTTTATTATAGTTTTAAGTGTTTTTATAG
GAGCACTTGCTTGCTCAGCT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLGIEIGNELYEPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPE
SALSEKVRRLGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVLYGR

Sequences:

>Translated_429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLGIEIGNELYEPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPE
SALSEKVRRLGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVLYGR
>Mature_429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLGIEIGNELYEPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPE
SALSEKVRRLGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVLYGR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47362; Mature: 47362

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE
KGSSLGIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKA
CCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEHCCCCCHHHHHHHCCEEEEECCCCCE
LIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDDSNEIMLGEDFAKNNKLKLGD
EEEEHHHHHHEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCCCCEECCC
TIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPE
EEEEECCCCCCCCEEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEEEECCH
SALSEKVRRLGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KIQSLMGITCIICLIVASIAISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEEEEEECCCHHH
ALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFIFAGLIALLGCLLPIKNITQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAGVLYGR
HHCCCCCCC
>Mature Secondary Structure
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE
KGSSLGIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKA
CCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEHCCCCCHHHHHHHCCEEEEECCCCCE
LIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKDDSNEIMLGEDFAKNNKLKLGD
EEEEHHHHHHEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCCCCEECCC
TIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGLYSSAEVRAFTIPE
EEEEECCCCCCCCEEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEEEECCH
SALSEKVRRLGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KIQSLMGITCIICLIVASIAISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFASENLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEEEEEECCCHHH
ALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFIFAGLIALLGCLLPIKNITQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAGVLYGR
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]