| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950920
Identifier: 153950920
GI number: 153950920
Start: 2529909
End: 2530559
Strand: Reverse
Name: 153950920
Synonym: YpsIP31758_2212
Alternate gene names: NA
Gene position: 2530559-2529909 (Counterclockwise)
Preceding gene: 153947490
Following gene: 153949648
Centisome position: 53.58
GC content: 41.94
Gene sequence:
>651_bases ATGAAAAGTATAGCAAATAATCAACTCCAATTCCACAATACTAAGTTCCACCCTATCCAAGAAGGGAGCCAAATTTGGTT AGCATCTTCTGAATTGGCGGCAGCGTTACAATATAAAAGTGCAAAATCAATAACCAACCTTTTTAATGAGAATAAGGACG AGTTCACTCCGGCGATGTCATTGGTCATTGAATCAATGACCAATGGAATAAACAACAAGTTACGCGCAAGGCGTGTCCGC ATTTTCTCTCTACGCGGTGCTCACTTGGTGGCAATGTTTGCCCGAACCATTGTTGCTAAAAAATTCCGTAGATGGGTTTT AGATCTCCTGGATAGAGAAGTTTCTATAGGGTATCAGGGGGCGTTTTGGAAGAAGAGCTATACGCTGACTATAAATACTG ATGAGCTGTGTTCTTTGGCATGGTTATACAAAGCTGCTAACCATATGCGGGAAGAGGCCGAGATTGTAAGTGAAGGGCTG AGCAAACTCCATTCACCGTTCGGTGCTTCACTTTGGACTATGGCAACTGAGTATGAAAGAACTCTTGAAGATGCTCGAGT TATTTTAAGTAGAGAAATCGGCAATATCCGTGAGGAGGATCTGACGGATATTGGTTGGCAAAGAGTATTACCAAGCATAC ATGTTCATTAA
Upstream 100 bases:
>100_bases GCATTAAGAGAAGTTGAGTGCGTAATCAAAATAGTGAAGCCCCGACTGCTAGTAACAATCAGGGCCTCGTTTTGTCAGCA ACCTTAAGCGAGTAACCGAC
Downstream 100 bases:
>100_bases ATAATTTTTGTGCGGTATATGGAAAAATAAAAACCGCCAGTTACCCGCTGGGGGCTATGTCGAAAACTGCATTAATGGAG AAAATAATGCGATCTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Antirepressor-Like Protein; Phage Protein; BRO Family Domain-Containing Protein; BRO Domain-Containing Protein; Bacteriophage Protein; Phage-Related Protein; APSE-2 Prophage; KilA N- Domain-Containing Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKSIANNQLQFHNTKFHPIQEGSQIWLASSELAAALQYKSAKSITNLFNENKDEFTPAMSLVIESMTNGINNKLRARRVR IFSLRGAHLVAMFARTIVAKKFRRWVLDLLDREVSIGYQGAFWKKSYTLTINTDELCSLAWLYKAANHMREEAEIVSEGL SKLHSPFGASLWTMATEYERTLEDARVILSREIGNIREEDLTDIGWQRVLPSIHVH
Sequences:
>Translated_216_residues MKSIANNQLQFHNTKFHPIQEGSQIWLASSELAAALQYKSAKSITNLFNENKDEFTPAMSLVIESMTNGINNKLRARRVR IFSLRGAHLVAMFARTIVAKKFRRWVLDLLDREVSIGYQGAFWKKSYTLTINTDELCSLAWLYKAANHMREEAEIVSEGL SKLHSPFGASLWTMATEYERTLEDARVILSREIGNIREEDLTDIGWQRVLPSIHVH >Mature_216_residues MKSIANNQLQFHNTKFHPIQEGSQIWLASSELAAALQYKSAKSITNLFNENKDEFTPAMSLVIESMTNGINNKLRARRVR IFSLRGAHLVAMFARTIVAKKFRRWVLDLLDREVSIGYQGAFWKKSYTLTINTDELCSLAWLYKAANHMREEAEIVSEGL SKLHSPFGASLWTMATEYERTLEDARVILSREIGNIREEDLTDIGWQRVLPSIHVH
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24783; Mature: 24783
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIANNQLQFHNTKFHPIQEGSQIWLASSELAAALQYKSAKSITNLFNENKDEFTPAMS CCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LVIESMTNGINNKLRARRVRIFSLRGAHLVAMFARTIVAKKFRRWVLDLLDREVSIGYQG HHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFWKKSYTLTINTDELCSLAWLYKAANHMREEAEIVSEGLSKLHSPFGASLWTMATEYER CEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TLEDARVILSREIGNIREEDLTDIGWQRVLPSIHVH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKSIANNQLQFHNTKFHPIQEGSQIWLASSELAAALQYKSAKSITNLFNENKDEFTPAMS CCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LVIESMTNGINNKLRARRVRIFSLRGAHLVAMFARTIVAKKFRRWVLDLLDREVSIGYQG HHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFWKKSYTLTINTDELCSLAWLYKAANHMREEAEIVSEGLSKLHSPFGASLWTMATEYER CEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TLEDARVILSREIGNIREEDLTDIGWQRVLPSIHVH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA