| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950919
Identifier: 153950919
GI number: 153950919
Start: 921909
End: 922118
Strand: Direct
Name: 153950919
Synonym: YpsIP31758_0763
Alternate gene names: NA
Gene position: 921909-922118 (Clockwise)
Preceding gene: 153948256
Following gene: 153949975
Centisome position: 19.52
GC content: 52.86
Gene sequence:
>210_bases ATGAACATTAACCCCTCCCTGCTTGAAGACTCGTTAGTCGACATGACGTTCATCACCACCTACAGTGGCATGAGCGACAA GTGGTTTTATAAACTTATCAGCGACGGCACGTTCCCCAAACCTATCAAACTGGGGCGCAGTTCCCGCTGGCTACACAGCG AGGTGCAAGCCTGGCTCCAGGCCCGCATAGAAGAGTCACGCCAGAAGTAA
Upstream 100 bases:
>100_bases CCACACTTTTTTACGTCAACTCCGGTTGGTATGTTGGAGCTGGCATGAATAATCATCAACCACGACTCCGGCTTACCTTT ACCTACCGGAGAATCTCGAT
Downstream 100 bases:
>100_bases GCCCTACTCACCCAGTTACCCCATTCCAGGCCGTATTTTCACTGTCCGCTCAATGCGGAGGGTTGCGGCTACCTGAAATC TGACATCCAAGGACCAGACA
Product: AlpA family protein
Products: NA
Alternate protein names: Regulatory Protein; Phage-Regulatory Protein; Phage Regulatory Protein; AlpA Family Protein
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MNINPSLLEDSLVDMTFITTYSGMSDKWFYKLISDGTFPKPIKLGRSSRWLHSEVQAWLQARIEESRQK
Sequences:
>Translated_69_residues MNINPSLLEDSLVDMTFITTYSGMSDKWFYKLISDGTFPKPIKLGRSSRWLHSEVQAWLQARIEESRQK >Mature_69_residues MNINPSLLEDSLVDMTFITTYSGMSDKWFYKLISDGTFPKPIKLGRSSRWLHSEVQAWLQARIEESRQK
Specific function: Unknown
COG id: COG3311
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8079; Mature: 8079
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINPSLLEDSLVDMTFITTYSGMSDKWFYKLISDGTFPKPIKLGRSSRWLHSEVQAWLQ CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH ARIEESRQK HHHHHHCCC >Mature Secondary Structure MNINPSLLEDSLVDMTFITTYSGMSDKWFYKLISDGTFPKPIKLGRSSRWLHSEVQAWLQ CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH ARIEESRQK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA