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The map label for this gene is recR [H]

Identifier: 153950897

GI number: 153950897

Start: 3442147

End: 3442752

Strand: Reverse

Name: recR [H]

Synonym: YpsIP31758_3057

Alternate gene names: 153950897

Gene position: 3442752-3442147 (Counterclockwise)

Preceding gene: 153949887

Following gene: 153948905

Centisome position: 72.89

GC content: 51.65

Gene sequence:

>606_bases
ATGCAAACCAGTCCACTCCTGGAGTCATTAATGGAGGCGTTGCGTTGTTTACCGGGTGTTGGCCCGAAATCGGCGCAACG
TATGGCATTTCAGCTATTACAGCGCGATCGTAGTGGTGGAATGCGCCTGGCGCAGGCTCTGACACGGGCAATGTCTGAAA
TAGGCCATTGTGCAGATTGTCGTACATTTACCGAGCAAGAGCACTGCACCATCTGCTTGAATCCCCGCCGTCAACAAAAT
GGTCAAATCTGTGTGGTCGAAAGCCCGGCAGATATCCATGCCATTGAGCAAACTGGCCAGTTTGGCGGGCGTTATTTTGT
GCTGATGGGGCATTTATCACCGATGGATGGTATTGGCCCTGGTGATATAGGGCTAGATCTACTGGAGAAACGGCTTTCTA
CTGAGGCTATCAGTGAGGTCATTTTAGCCACGAATCCAACCGTTGAAGGGGATGCAACAGCCAACTATATCGGCCAGATG
TGTGGCCAATATGGCATACTGGCCAGCCGCATCGCCCATGGCGTTCCTGTTGGTGGCGAGTTAGAAATGGTTGATGGCAC
CACGTTATCTCACTCGTTAGCAGGGCGTAATCCCATCAAGTACTGA

Upstream 100 bases:

>100_bases
TGAATGACGCTGCTCGTCGTATTGATGAAACACAAAAAGAGAAAATGGCCTCTGTATCCAATGGGATGCAATTGCCACCA
GGCTTTAAGATGCCGTTCTG

Downstream 100 bases:

>100_bases
TCGTATTCCTGACCGTGGGCGATGACCTTATTATTGATTATCTTACGGATAATTTTATTCAGAATAATAAATCAATCGCC
CCCGATTCTCTGTTTTTTCT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQN
GQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQM
CGQYGILASRIAHGVPVGGELEMVDGTTLSHSLAGRNPIKY

Sequences:

>Translated_201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQN
GQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQM
CGQYGILASRIAHGVPVGGELEMVDGTTLSHSLAGRNPIKY
>Mature_201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEHCTICLNPRRQQN
GQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQM
CGQYGILASRIAHGVPVGGELEMVDGTTLSHSLAGRNPIKY

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=201, Percent_Identity=85.5721393034826, Blast_Score=359, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 21654; Mature: 21654

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
RTFTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGP
HHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEMVDGTTLSHSLAGRNPIKY
EEEECCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
RTFTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPMDGIGP
HHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GDIGLDLLEKRLSTEAISEVILATNPTVEGDATANYIGQMCGQYGILASRIAHGVPVGGE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEMVDGTTLSHSLAGRNPIKY
EEEECCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA