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The map label for this gene is fliO [H]

Identifier: 153950895

GI number: 153950895

Start: 2604521

End: 2605057

Strand: Direct

Name: fliO [H]

Synonym: YpsIP31758_2301

Alternate gene names: 153950895

Gene position: 2604521-2605057 (Clockwise)

Preceding gene: 153948620

Following gene: 153950312

Centisome position: 55.14

GC content: 57.73

Gene sequence:

>537_bases
ATGACTGCAGCCGCACCGGCCTCGACAATACTGGCCTCGACAACATTGGCCTCAACAACAACACAGCAAACCGCAACCAC
AGGGTTTGCTGCCAGTCATCCGGGGTCGAACAGTCAGTTACAGCCGAGCAGTCAACTGCAACCGCAATCAAGCGCCGCCA
CCCCGGCCATGCCTGCAGGGGGGGTGTTAACGCAGGTGGGCAGTGCGCTGGGCGGTATTCTGTTATTGATTCTGTTTGTG
GCCTGGCTGGTGCGGCGGTTGGGGTTTGCCCCACAGGCCCGTAATAGCAAGCTACTGAACGTGCGGGCCAGTTGTCAGGT
TGGGCAACGTGAGCGGGTGGTGATTGTCGAAGTCGATGACACCTGGCTGGTATTGGGCGTTACGGCCCAACAGGTTACCC
CCTTGCATACACTGGCGCGTCCGGTGGTTGAGGCACCGCGACAGGCGGATGGCATACGATCAACAAGCAATGCGCAAGCG
GCTGATTTTCGCCAACTGCTGAACAAAATATTGAAACATCCGGAAAAATCGGCATGA

Upstream 100 bases:

>100_bases
TGATTGCTCAGGGCGAAGTGGTGGTGGTGGCCGATAAATACGGGGTCCGCATCACGGACATCATTACGCCATCTGAACGT
ATGCGTCGTTTGAGCCGCTA

Downstream 100 bases:

>100_bases
CGTCCCATCGCCCTGTTTTTATTAGCAAACGTTCTCTCATCACTGGCGCGCTGTTCTGCCGGATGTGGCGCACCATAATA
ATGTCGGTTATCAATAAAAC

Product: flagellar protein fliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTAAAPASTILASTTLASTTTQQTATTGFAASHPGSNSQLQPSSQLQPQSSAATPAMPAGGVLTQVGSALGGILLLILFV
AWLVRRLGFAPQARNSKLLNVRASCQVGQRERVVIVEVDDTWLVLGVTAQQVTPLHTLARPVVEAPRQADGIRSTSNAQA
ADFRQLLNKILKHPEKSA

Sequences:

>Translated_178_residues
MTAAAPASTILASTTLASTTTQQTATTGFAASHPGSNSQLQPSSQLQPQSSAATPAMPAGGVLTQVGSALGGILLLILFV
AWLVRRLGFAPQARNSKLLNVRASCQVGQRERVVIVEVDDTWLVLGVTAQQVTPLHTLARPVVEAPRQADGIRSTSNAQA
ADFRQLLNKILKHPEKSA
>Mature_177_residues
TAAAPASTILASTTLASTTTQQTATTGFAASHPGSNSQLQPSSQLQPQSSAATPAMPAGGVLTQVGSALGGILLLILFVA
WLVRRLGFAPQARNSKLLNVRASCQVGQRERVVIVEVDDTWLVLGVTAQQVTPLHTLARPVVEAPRQADGIRSTSNAQAA
DFRQLLNKILKHPEKSA

Specific function: Required for both, motility and virulence [H]

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 18627; Mature: 18495

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAPASTILASTTLASTTTQQTATTGFAASHPGSNSQLQPSSQLQPQSSAATPAMPAG
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GVLTQVGSALGGILLLILFVAWLVRRLGFAPQARNSKLLNVRASCQVGQRERVVIVEVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECC
TWLVLGVTAQQVTPLHTLARPVVEAPRQADGIRSTSNAQAADFRQLLNKILKHPEKSA
CEEEEECCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAAAPASTILASTTLASTTTQQTATTGFAASHPGSNSQLQPSSQLQPQSSAATPAMPAG
CCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GVLTQVGSALGGILLLILFVAWLVRRLGFAPQARNSKLLNVRASCQVGQRERVVIVEVDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECC
TWLVLGVTAQQVTPLHTLARPVVEAPRQADGIRSTSNAQAADFRQLLNKILKHPEKSA
CEEEEECCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685 [H]