Click here to switch to the map view.

The map label for this gene is 153950882

Identifier: 153950882

GI number: 153950882

Start: 1078699

End: 1080231

Strand: Direct

Name: 153950882

Synonym: YpsIP31758_0897

Alternate gene names: NA

Gene position: 1078699-1080231 (Clockwise)

Preceding gene: 153950255

Following gene: 153948382

Centisome position: 22.84

GC content: 49.64

Gene sequence:

>1533_bases
ATGGCAAAAGGTTATTATCTGGTTGTGGGCGATGAAACAACTTGCGGGGGAGTTATCACCGAAGGGGAACCGACCCACAC
AATAATGGGAAGAGCCGTCGCCCGTGAACAAGACCGTATTACCTGCGGTAAGCATCCGGGAACCTACATCATTGTCGGGC
ACATTCCCGGAGACACAATACTGGGACGCAAGTTTGCGGGTTCACTACACAGCACAAGTAACTGTCCGTGCAAGGCAAGA
TTTATCCCTTCGATGATGAATGATGCCTATGAGTTAATCGGGTCACCTGCCTCCGGTCAGTCCAGTATCGCACCCTCATT
CACGGAGACCTCCGAATCACCACCAGACGTAACCCCCGTTTTTGCCAAATCTTGTCTGCGGGAAAAGGGGTGTACCGATG
CGGGTACCGAGGGTGAACCACACCGCAATTTCGGCAAAATGGCCTTTTATCAGGCTATTCCCCCCTCACCAACCTCCCCA
ACTGATAATAATGAAGTGGAACAACGCGCTCAAACTGCCAGGCGTAAACCTGTGGAAACAGAGCCTGATGTTAAGACACC
GTGGTACAAGCGGGTGTTGGGGAGAACCCGTGCGGCTTCGGCCGCGGTAGTTGTACCGGTATCGACTGGGGCGGGGGTGG
CGGCCTTAGAGCAAGCGGGTATTCAGGGAATGCGGTTTGTCGGTGGTAACCTGATGACGGCGGGACGCTGGATGGTGGGT
TCATCACCTGTCGGTGCTGCTATCATGGGAATGATGCCGGGCACCCTGAATGAAGGTGAAACCGATTTACTCGACAAACT
CAAGCTGGAAAACATTGCTAAGAATGGTGGCTCAGCACCAACACGCGTGCGTTTTCGCTGGGTTGATAGCGGAAATGGCC
GGTTAAAAGCCGAGGGCTATCATATGAGTGCTGAAGGCGGATTGGACAGAGTGCCAGTACGCAAGATGACGCTCAATGTC
TTTACCGGCAATTATGAGTTTTGGGAAGATGGCGCGGCAGGGCCAACCATTCTGTGGACACCGAATGATCCCGGATTTAA
AGCCCCATCGAATACCGGTAATAACGACGGGCCGATCATTCGCACTACGATTACGGTATTACCGATGCCGGAAGCTGACG
AAACCGGCGAGCATTCAACTACATTACCCATGCCAGAGGAGAAGGATTTCCGCGATTATATTCTGATCCATCCGTTGCTT
GATTTGCCACCGTTGTATATCTATCTCAGTAAAAATCCAGATGATCCTATCTGGACTGAAAGAAAGAAAATAACTCCGGT
TCAAAATGCATATGGACATTGGAAAAAACATGGTTCTGAATTTCCAGAACTAACTAATTCGAAAGAGTATGTCGATGCGA
CTCACGATTTTGTTAACAACCCTCCGGATGGGGCGCTAAACAAAACTAGAAACAATGGAGACGAGCTTTTTTATCATCCA
GAAAGTAATACATTGGGGATTAAAGCAAAAAATGGTGCCCCAAGGACTATGTTTAAACCAACCGATAAAATGGACTATTG
GAACGATCAATGA

Upstream 100 bases:

>100_bases
AACACGGTTTCAGCTTTTAATTGCCGAACTCATCATTATCCCTTACCTTTTTGGGCATATTGCCAAATTGATATTGGCAA
ACGGATAAATAAGGGATGAT

Downstream 100 bases:

>100_bases
TTACTGAAGACTATCCATGCCCGTGTTGTGGTGAAAAAGTATTTGAGGCTCTAGGGGAACATGACATTTGTCCTAACTGC
GATTGGGAAGATGATCCTTT

Product: PAAR/S-type pyocin domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAKGYYLVVGDETTCGGVITEGEPTHTIMGRAVAREQDRITCGKHPGTYIIVGHIPGDTILGRKFAGSLHSTSNCPCKAR
FIPSMMNDAYELIGSPASGQSSIAPSFTETSESPPDVTPVFAKSCLREKGCTDAGTEGEPHRNFGKMAFYQAIPPSPTSP
TDNNEVEQRAQTARRKPVETEPDVKTPWYKRVLGRTRAASAAVVVPVSTGAGVAALEQAGIQGMRFVGGNLMTAGRWMVG
SSPVGAAIMGMMPGTLNEGETDLLDKLKLENIAKNGGSAPTRVRFRWVDSGNGRLKAEGYHMSAEGGLDRVPVRKMTLNV
FTGNYEFWEDGAAGPTILWTPNDPGFKAPSNTGNNDGPIIRTTITVLPMPEADETGEHSTTLPMPEEKDFRDYILIHPLL
DLPPLYIYLSKNPDDPIWTERKKITPVQNAYGHWKKHGSEFPELTNSKEYVDATHDFVNNPPDGALNKTRNNGDELFYHP
ESNTLGIKAKNGAPRTMFKPTDKMDYWNDQ

Sequences:

>Translated_510_residues
MAKGYYLVVGDETTCGGVITEGEPTHTIMGRAVAREQDRITCGKHPGTYIIVGHIPGDTILGRKFAGSLHSTSNCPCKAR
FIPSMMNDAYELIGSPASGQSSIAPSFTETSESPPDVTPVFAKSCLREKGCTDAGTEGEPHRNFGKMAFYQAIPPSPTSP
TDNNEVEQRAQTARRKPVETEPDVKTPWYKRVLGRTRAASAAVVVPVSTGAGVAALEQAGIQGMRFVGGNLMTAGRWMVG
SSPVGAAIMGMMPGTLNEGETDLLDKLKLENIAKNGGSAPTRVRFRWVDSGNGRLKAEGYHMSAEGGLDRVPVRKMTLNV
FTGNYEFWEDGAAGPTILWTPNDPGFKAPSNTGNNDGPIIRTTITVLPMPEADETGEHSTTLPMPEEKDFRDYILIHPLL
DLPPLYIYLSKNPDDPIWTERKKITPVQNAYGHWKKHGSEFPELTNSKEYVDATHDFVNNPPDGALNKTRNNGDELFYHP
ESNTLGIKAKNGAPRTMFKPTDKMDYWNDQ
>Mature_509_residues
AKGYYLVVGDETTCGGVITEGEPTHTIMGRAVAREQDRITCGKHPGTYIIVGHIPGDTILGRKFAGSLHSTSNCPCKARF
IPSMMNDAYELIGSPASGQSSIAPSFTETSESPPDVTPVFAKSCLREKGCTDAGTEGEPHRNFGKMAFYQAIPPSPTSPT
DNNEVEQRAQTARRKPVETEPDVKTPWYKRVLGRTRAASAAVVVPVSTGAGVAALEQAGIQGMRFVGGNLMTAGRWMVGS
SPVGAAIMGMMPGTLNEGETDLLDKLKLENIAKNGGSAPTRVRFRWVDSGNGRLKAEGYHMSAEGGLDRVPVRKMTLNVF
TGNYEFWEDGAAGPTILWTPNDPGFKAPSNTGNNDGPIIRTTITVLPMPEADETGEHSTTLPMPEEKDFRDYILIHPLLD
LPPLYIYLSKNPDDPIWTERKKITPVQNAYGHWKKHGSEFPELTNSKEYVDATHDFVNNPPDGALNKTRNNGDELFYHPE
SNTLGIKAKNGAPRTMFKPTDKMDYWNDQ

Specific function: Unknown

COG id: COG5529

COG function: function code R; Pyocin large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55629; Mature: 55498

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGYYLVVGDETTCGGVITEGEPTHTIMGRAVAREQDRITCGKHPGTYIIVGHIPGDTI
CCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCC
LGRKFAGSLHSTSNCPCKARFIPSMMNDAYELIGSPASGQSSIAPSFTETSESPPDVTPV
HHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHH
FAKSCLREKGCTDAGTEGEPHRNFGKMAFYQAIPPSPTSPTDNNEVEQRAQTARRKPVET
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
EPDVKTPWYKRVLGRTRAASAAVVVPVSTGAGVAALEQAGIQGMRFVGGNLMTAGRWMVG
CCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEECCCEEECCEEEEC
SSPVGAAIMGMMPGTLNEGETDLLDKLKLENIAKNGGSAPTRVRFRWVDSGNGRLKAEGY
CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCE
HMSAEGGLDRVPVRKMTLNVFTGNYEFWEDGAAGPTILWTPNDPGFKAPSNTGNNDGPII
EEECCCCCCCCCEEEEEEEEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE
RTTITVLPMPEADETGEHSTTLPMPEEKDFRDYILIHPLLDLPPLYIYLSKNPDDPIWTE
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC
RKKITPVQNAYGHWKKHGSEFPELTNSKEYVDATHDFVNNPPDGALNKTRNNGDELFYHP
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC
ESNTLGIKAKNGAPRTMFKPTDKMDYWNDQ
CCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKGYYLVVGDETTCGGVITEGEPTHTIMGRAVAREQDRITCGKHPGTYIIVGHIPGDTI
CCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCC
LGRKFAGSLHSTSNCPCKARFIPSMMNDAYELIGSPASGQSSIAPSFTETSESPPDVTPV
HHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHH
FAKSCLREKGCTDAGTEGEPHRNFGKMAFYQAIPPSPTSPTDNNEVEQRAQTARRKPVET
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCC
EPDVKTPWYKRVLGRTRAASAAVVVPVSTGAGVAALEQAGIQGMRFVGGNLMTAGRWMVG
CCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCEEEECCCEEECCEEEEC
SSPVGAAIMGMMPGTLNEGETDLLDKLKLENIAKNGGSAPTRVRFRWVDSGNGRLKAEGY
CCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCE
HMSAEGGLDRVPVRKMTLNVFTGNYEFWEDGAAGPTILWTPNDPGFKAPSNTGNNDGPII
EEECCCCCCCCCEEEEEEEEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE
RTTITVLPMPEADETGEHSTTLPMPEEKDFRDYILIHPLLDLPPLYIYLSKNPDDPIWTE
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC
RKKITPVQNAYGHWKKHGSEFPELTNSKEYVDATHDFVNNPPDGALNKTRNNGDELFYHP
CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC
ESNTLGIKAKNGAPRTMFKPTDKMDYWNDQ
CCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA