| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950858
Identifier: 153950858
GI number: 153950858
Start: 910969
End: 911835
Strand: Reverse
Name: 153950858
Synonym: YpsIP31758_0746
Alternate gene names: NA
Gene position: 911835-910969 (Counterclockwise)
Preceding gene: 153947586
Following gene: 153949345
Centisome position: 19.31
GC content: 49.02
Gene sequence:
>867_bases ATGTCTACTTCACTCAGCGCAGTTATCGACGAGCCGCAGGTTCTAACCGGCCACACCGATATGATTTGCTCCACCAGCAT TGAACGTATCATCACCGTGCGTAATACCGCACTGGTGCAGATTGACGCGCTTATCCACCAGCTTGAGGATATTTCGGCCA TCACCCACAGCATTGGCGGTGGAGTGGCAAGAGACTGGGCCATGCGACAAGACTTCCGCTGCGGCAGCTGGCTCATGGAG AAAACAGAAACGGGCATGAAAGCGATTACCTGCAATCTCGATCGCAGTATATGGCGAGATCTGATGTTGAAATCGGGGAT GCTGAGCCTGATGGATGCCCAAGCCCGTGACCAGTGGTACAGAAACCTTGAGGGAGATAATATTCCTGCCATCAGCGAAG CCAACATACTCAGTACCTTTGAGCAACTTCACCAGCAGAAAGACGAGGTATTTGAACGCGGGGTCATCAATTTATTCAAA GGATTATCCTGGCACTTTAAAACCAACAGTCCATGCCAATTTGGCAAAAAAATAATCATGAGCAATTTGGTCAGTTGCAA CCAATGGGGCTTTACCCTGAACCACGGTTACCGGCGAGACCAGTTGGCGGATTTGGAACGCATGTTGTATTTGCTGGACA GTAAGGCTATCCCGGATAACCGGGGCGATGTGACAACTCGGCTGTATGAACATATGAGTGCCAATCCGCATATAGCGAAA GTTTATGAAGACGATTACTTTTCGATAAAATACTTCATGAAGGGCTCAGCGCACCTGACATTTAGAAAGCCTGAGTTGAT TGACAAGATGAATGCTATCGTGGCGAAACATTACCCAGGCGTGCTGCCGGAACGTACAGCCAGGTAA
Upstream 100 bases:
>100_bases ATTAGGAACTGCCTTAAACGGCAGACACTGGCACCTAAAATATCCCTCTTCCTCGACGCCAACAACAAGAGTTGGCGTTT TGCTTTATGGAGTTCCTACG
Downstream 100 bases:
>100_bases TGCGAACTCCGTCTTACTTTCTTTGCATGGCTGGTAAGTACGTCTCTGGCGGATCATAAAACCTCTGTAGAAAACTGAAG CGATAGCCCAGACCTTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSTSLSAVIDEPQVLTGHTDMICSTSIERIITVRNTALVQIDALIHQLEDISAITHSIGGGVARDWAMRQDFRCGSWLME KTETGMKAITCNLDRSIWRDLMLKSGMLSLMDAQARDQWYRNLEGDNIPAISEANILSTFEQLHQQKDEVFERGVINLFK GLSWHFKTNSPCQFGKKIIMSNLVSCNQWGFTLNHGYRRDQLADLERMLYLLDSKAIPDNRGDVTTRLYEHMSANPHIAK VYEDDYFSIKYFMKGSAHLTFRKPELIDKMNAIVAKHYPGVLPERTAR
Sequences:
>Translated_288_residues MSTSLSAVIDEPQVLTGHTDMICSTSIERIITVRNTALVQIDALIHQLEDISAITHSIGGGVARDWAMRQDFRCGSWLME KTETGMKAITCNLDRSIWRDLMLKSGMLSLMDAQARDQWYRNLEGDNIPAISEANILSTFEQLHQQKDEVFERGVINLFK GLSWHFKTNSPCQFGKKIIMSNLVSCNQWGFTLNHGYRRDQLADLERMLYLLDSKAIPDNRGDVTTRLYEHMSANPHIAK VYEDDYFSIKYFMKGSAHLTFRKPELIDKMNAIVAKHYPGVLPERTAR >Mature_287_residues STSLSAVIDEPQVLTGHTDMICSTSIERIITVRNTALVQIDALIHQLEDISAITHSIGGGVARDWAMRQDFRCGSWLMEK TETGMKAITCNLDRSIWRDLMLKSGMLSLMDAQARDQWYRNLEGDNIPAISEANILSTFEQLHQQKDEVFERGVINLFKG LSWHFKTNSPCQFGKKIIMSNLVSCNQWGFTLNHGYRRDQLADLERMLYLLDSKAIPDNRGDVTTRLYEHMSANPHIAKV YEDDYFSIKYFMKGSAHLTFRKPELIDKMNAIVAKHYPGVLPERTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32934; Mature: 32803
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLSAVIDEPQVLTGHTDMICSTSIERIITVRNTALVQIDALIHQLEDISAITHSIGG CCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC GVARDWAMRQDFRCGSWLMEKTETGMKAITCNLDRSIWRDLMLKSGMLSLMDAQARDQWY CHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RNLEGDNIPAISEANILSTFEQLHQQKDEVFERGVINLFKGLSWHFKTNSPCQFGKKIIM HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH SNLVSCNQWGFTLNHGYRRDQLADLERMLYLLDSKAIPDNRGDVTTRLYEHMSANPHIAK HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE VYEDDYFSIKYFMKGSAHLTFRKPELIDKMNAIVAKHYPGVLPERTAR EECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STSLSAVIDEPQVLTGHTDMICSTSIERIITVRNTALVQIDALIHQLEDISAITHSIGG CCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC GVARDWAMRQDFRCGSWLMEKTETGMKAITCNLDRSIWRDLMLKSGMLSLMDAQARDQWY CHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RNLEGDNIPAISEANILSTFEQLHQQKDEVFERGVINLFKGLSWHFKTNSPCQFGKKIIM HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH SNLVSCNQWGFTLNHGYRRDQLADLERMLYLLDSKAIPDNRGDVTTRLYEHMSANPHIAK HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEE VYEDDYFSIKYFMKGSAHLTFRKPELIDKMNAIVAKHYPGVLPERTAR EECCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA