| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is mviM [H]
Identifier: 153950850
GI number: 153950850
Start: 2360091
End: 2361020
Strand: Reverse
Name: mviM [H]
Synonym: YpsIP31758_2047
Alternate gene names: 153950850
Gene position: 2361020-2360091 (Counterclockwise)
Preceding gene: 153950167
Following gene: 153947835
Centisome position: 49.99
GC content: 51.51
Gene sequence:
>930_bases ATGATTGATAAGGACGATATGAAAAAACTACGCGTGGGTATCGTGGGGCTGGGGGGCATTGCGCAAAAGGCTTATTTGCC TATTTTAACTCAGGCGCAGGGTTGGCAACTGGTTGGCGCATTTTCACCCAATCAAGCTAAAGCTCAACCGCTATGTGATA GCTATCGTATGCGTTATTTTTCACGCTTGGATACGCTCGCTGCGGCAAGTGATGCCGTTTTTGTCCATAGTAGTACCGCC AGCCATTTTCAGGTCGTGCATGATTTATTGCAGGCCGGAGTCCATGTCTATGTGGATAAACCCCTGGCTGAAACACGAAA GCAATCAGAGCAATTGATCGAACTGGCAGATAAACAGCATTTAGCGCTGATGGTGGGTTTTAATCGCCGTTTTGCCCCGT TATATCAGCAGTTGAAACAACAGGCGAGCAGCCCGGTCTCACTGCGGATGGAGAAGCACCGGCTAAGTAGCATCGGGCCA CACGACTTAGGTTTTACCTTGCTCGATGACTATCTGCATGTCGTGGATACGGCGCTGTGGCTAGGCGGTGAGGGGGCAAG ATTGACGGGTGGGGCAGTTCAGACCAATGCTCAGGGGCAGATGCTGTATGCGGAGCACCATTTCCAGCAAGGTGGTTGTT TGATCACCACCAGTATGCACCGTCAGGCCGGAACTCAGCGGGAAAGCGTGCAAGTTATCAGTGACGGTGCCTGTTATCAC ATTACCGATATGCGCCAATGGCAGCAGGCGTCAGCGGGGCAGGTGATAAGCCAACTTGCTCCCGGCTGGCAAACGACATT GGAACAACGTGGTTTTACCGGGGCTGTGCATCATTTCATTGAGGCGGTCAGTAATCAAACGAGGCCGCAAGTCTCAGGTG AAGATGCGATTGTTGCACAACGTATGATTGAGCGTATTTTGCAGCAGTAG
Upstream 100 bases:
>100_bases ATAGCCCTTGAAAAAACAGCCCTTGAAGCTAGGGTTGCCCAGCTTGAACAGCAGGTTATCCAGTTGTCACGCCGTTTGGA CGACGTGTTGATTCAACTGG
Downstream 100 bases:
>100_bases ATGATGTTTACAGTAATAGACGATGAGATCATCGGTTGGCATGACATCACATCAAGATCACATGGTGAGAGTGAAAATCG ATTGGCTTCAGTAATTGGTT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIDKDDMKKLRVGIVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTA SHFQVVHDLLQAGVHVYVDKPLAETRKQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGP HDLGFTLLDDYLHVVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYH ITDMRQWQQASAGQVISQLAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ
Sequences:
>Translated_309_residues MIDKDDMKKLRVGIVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTA SHFQVVHDLLQAGVHVYVDKPLAETRKQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGP HDLGFTLLDDYLHVVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYH ITDMRQWQQASAGQVISQLAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ >Mature_309_residues MIDKDDMKKLRVGIVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTA SHFQVVHDLLQAGVHVYVDKPLAETRKQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGP HDLGFTLLDDYLHVVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYH ITDMRQWQQASAGQVISQLAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To S.typhimurium mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=300, Percent_Identity=62.3333333333333, Blast_Score=399, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 34226; Mature: 34226
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKDDMKKLRVGIVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYF CCCHHHHHHHHHHEEECCHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH SRLDTLAAASDAVFVHSSTASHFQVVHDLLQAGVHVYVDKPLAETRKQSEQLIELADKQH HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCC LALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLHVVDTALW EEEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYH CCCCCCEEECCCEEECCCCCEEEHHHHHCCCCEEEEECHHHHCCCCHHHHHEECCCCEEE ITDMRQWQQASAGQVISQLAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQ EHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH RMIERILQQ HHHHHHHCC >Mature Secondary Structure MIDKDDMKKLRVGIVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYF CCCHHHHHHHHHHEEECCHHHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH SRLDTLAAASDAVFVHSSTASHFQVVHDLLQAGVHVYVDKPLAETRKQSEQLIELADKQH HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCC LALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLHVVDTALW EEEEEECCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYH CCCCCCEEECCCEEECCCCCEEEHHHHHCCCCEEEEECHHHHCCCCHHHHHEECCCCEEE ITDMRQWQQASAGQVISQLAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQ EHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH RMIERILQQ HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]