| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950647
Identifier: 153950647
GI number: 153950647
Start: 2537557
End: 2538942
Strand: Reverse
Name: 153950647
Synonym: YpsIP31758_2224
Alternate gene names: NA
Gene position: 2538942-2537557 (Counterclockwise)
Preceding gene: 153950319
Following gene: 153950049
Centisome position: 53.75
GC content: 48.7
Gene sequence:
>1386_bases ATGAGTAAAAAACTGGATTTTAGCGGTAAACCCCGTATTCGCCTGACAGCTGATGGTCTGGCGAATGTAATGACAGGTAT GGGGACCGACCGTGACCGGCGCATGTACAGCCGATTTATGTATGGAGTGATGCAGGACTTTACCGAACTGGAAGCGGCGT ATACAGAAAACTGGATCGCCCGTTCAATCATCGATATCCCGGTAGATGACGCCACCCGTGAGTGGCGGACATTTCCATCT GATGATGCCTCAATACTGCGTGATGTTGAAAATCATTTCAATATTAAGTGTGTGACACAGGAAGCCTTTAAATGGGCTGG GTTATACGGTGGTGCGGGTGTCTTGATGCTGACTGATCAGGATCTCTCTCGTCCACTTAAGGTGGGTAAAATAAAAAAAG GCTCATTGAAGCGTCTTTTGGTTTTAGACCGTATGTTGATCAACGGTCAGCGATATAACGTGTCCGATCCTCTCGCTGAG AATTTTATGCAGCCAGATTATTATCGGGTTAATGGTGGTCAACAGCTCATTCATTTCAGCCATTTTGTTCGAGCACCCGG CGCAGCGTTACCAATGCGGTTACGCATGATCAATGGTGGTTGGGATGACAGCCGGTTAAGACGTTGCCTTGAAGACGTGA AAGATGCAGTTGCGGCCAAAGGGGGGATTTCCTCACTGATTATGGAAGCCAATATCGACACCATAAACCGTAAGAATCTG GCGAATGATCTTTCTTCTGGTGATATGGATGAGGCGATAGCAAAGCGTTATCACATTTTTGGCATGATGAAATCACTCTT CCGGCTAGCTTTGTTGGATACCGATGAGGTACTGGATCGCAAACAGATATCCTTTGGTGGTCTGGGGGAAGTACTGGCTG CCCTGATGGAATGGACATCCGGCGCATCAGGTATTCCCATGACCCGATTGTTCGGCGTGCAGGCAAAAGGGCTGGGCGAC TCCGGGCAAGGTGATCAGAACAATTATTTCAGCACTATCAAGGGGGATCAGGAAGCGAAATACCGACCATTTTTGAAAAG ACTGGATCAGGTGTTTGTCCGTTCAGCACTGGGGACGATGCCGGATCATCTGGATTTTACCTTTGCGCCATTGTCTCAAC CCACGGATACCGAAATTTCGACACAACGGCTGGCAGATGCTCAGGCTGATGAAATTCGCCTTGGGCAGAGAGTGGTATTG CCATCGCAGGTAGCCCGTAAATTGATGGAGCAAGGGGTTTATGGCATTGACGAAAATGATATTACCCGACTTGCCGATGA CGAGGCCGCCGAACGACAAGGTGATTATCAGTTCAGGCTTGGCAACACTTCAGACGCTGATAAAACAGATCCCACCACAT CGCAGAGCCCCCATCCGACCAATTAA
Upstream 100 bases:
>100_bases ACAGTCACAAAAACGACGACATTCTCGACACAATCATGGACTCGATAGAGATCGAATTAATTGCTGGTGGCAGCATCAGT TACGACAAGTGGGTTTAACG
Downstream 100 bases:
>100_bases ACAGACGAATGAAACCGAATACTATTATCGTGCTCGGTTACGTGACATTGTCCGGTTAATGGCCCAATCCGTGGATGAAG TATTAATCCCTGTGTTACGC
Product: HI1409 family phage-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSKKLDFSGKPRIRLTADGLANVMTGMGTDRDRRMYSRFMYGVMQDFTELEAAYTENWIARSIIDIPVDDATREWRTFPS DDASILRDVENHFNIKCVTQEAFKWAGLYGGAGVLMLTDQDLSRPLKVGKIKKGSLKRLLVLDRMLINGQRYNVSDPLAE NFMQPDYYRVNGGQQLIHFSHFVRAPGAALPMRLRMINGGWDDSRLRRCLEDVKDAVAAKGGISSLIMEANIDTINRKNL ANDLSSGDMDEAIAKRYHIFGMMKSLFRLALLDTDEVLDRKQISFGGLGEVLAALMEWTSGASGIPMTRLFGVQAKGLGD SGQGDQNNYFSTIKGDQEAKYRPFLKRLDQVFVRSALGTMPDHLDFTFAPLSQPTDTEISTQRLADAQADEIRLGQRVVL PSQVARKLMEQGVYGIDENDITRLADDEAAERQGDYQFRLGNTSDADKTDPTTSQSPHPTN
Sequences:
>Translated_461_residues MSKKLDFSGKPRIRLTADGLANVMTGMGTDRDRRMYSRFMYGVMQDFTELEAAYTENWIARSIIDIPVDDATREWRTFPS DDASILRDVENHFNIKCVTQEAFKWAGLYGGAGVLMLTDQDLSRPLKVGKIKKGSLKRLLVLDRMLINGQRYNVSDPLAE NFMQPDYYRVNGGQQLIHFSHFVRAPGAALPMRLRMINGGWDDSRLRRCLEDVKDAVAAKGGISSLIMEANIDTINRKNL ANDLSSGDMDEAIAKRYHIFGMMKSLFRLALLDTDEVLDRKQISFGGLGEVLAALMEWTSGASGIPMTRLFGVQAKGLGD SGQGDQNNYFSTIKGDQEAKYRPFLKRLDQVFVRSALGTMPDHLDFTFAPLSQPTDTEISTQRLADAQADEIRLGQRVVL PSQVARKLMEQGVYGIDENDITRLADDEAAERQGDYQFRLGNTSDADKTDPTTSQSPHPTN >Mature_460_residues SKKLDFSGKPRIRLTADGLANVMTGMGTDRDRRMYSRFMYGVMQDFTELEAAYTENWIARSIIDIPVDDATREWRTFPSD DASILRDVENHFNIKCVTQEAFKWAGLYGGAGVLMLTDQDLSRPLKVGKIKKGSLKRLLVLDRMLINGQRYNVSDPLAEN FMQPDYYRVNGGQQLIHFSHFVRAPGAALPMRLRMINGGWDDSRLRRCLEDVKDAVAAKGGISSLIMEANIDTINRKNLA NDLSSGDMDEAIAKRYHIFGMMKSLFRLALLDTDEVLDRKQISFGGLGEVLAALMEWTSGASGIPMTRLFGVQAKGLGDS GQGDQNNYFSTIKGDQEAKYRPFLKRLDQVFVRSALGTMPDHLDFTFAPLSQPTDTEISTQRLADAQADEIRLGQRVVLP SQVARKLMEQGVYGIDENDITRLADDEAAERQGDYQFRLGNTSDADKTDPTTSQSPHPTN
Specific function: Unknown
COG id: COG3567
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006445 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51591; Mature: 51460
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLDFSGKPRIRLTADGLANVMTGMGTDRDRRMYSRFMYGVMQDFTELEAAYTENWIA CCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIIDIPVDDATREWRTFPSDDASILRDVENHFNIKCVTQEAFKWAGLYGGAGVLMLTDQ HHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCEEEEECC DLSRPLKVGKIKKGSLKRLLVLDRMLINGQRYNVSDPLAENFMQPDYYRVNGGQQLIHFS HHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHH HFVRAPGAALPMRLRMINGGWDDSRLRRCLEDVKDAVAAKGGISSLIMEANIDTINRKNL HHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH ANDLSSGDMDEAIAKRYHIFGMMKSLFRLALLDTDEVLDRKQISFGGLGEVLAALMEWTS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC GASGIPMTRLFGVQAKGLGDSGQGDQNNYFSTIKGDQEAKYRPFLKRLDQVFVRSALGTM CCCCCCHHHHHCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC PDHLDFTFAPLSQPTDTEISTQRLADAQADEIRLGQRVVLPSQVARKLMEQGVYGIDEND CCCCCEEECCCCCCCCCCHHHHHHHCCCHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCC ITRLADDEAAERQGDYQFRLGNTSDADKTDPTTSQSPHPTN HHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKLDFSGKPRIRLTADGLANVMTGMGTDRDRRMYSRFMYGVMQDFTELEAAYTENWIA CCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIIDIPVDDATREWRTFPSDDASILRDVENHFNIKCVTQEAFKWAGLYGGAGVLMLTDQ HHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCEEEEECC DLSRPLKVGKIKKGSLKRLLVLDRMLINGQRYNVSDPLAENFMQPDYYRVNGGQQLIHFS HHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEECCCHHHHHHH HFVRAPGAALPMRLRMINGGWDDSRLRRCLEDVKDAVAAKGGISSLIMEANIDTINRKNL HHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH ANDLSSGDMDEAIAKRYHIFGMMKSLFRLALLDTDEVLDRKQISFGGLGEVLAALMEWTS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCC GASGIPMTRLFGVQAKGLGDSGQGDQNNYFSTIKGDQEAKYRPFLKRLDQVFVRSALGTM CCCCCCHHHHHCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC PDHLDFTFAPLSQPTDTEISTQRLADAQADEIRLGQRVVLPSQVARKLMEQGVYGIDEND CCCCCEEECCCCCCCCCCHHHHHHHCCCHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCC ITRLADDEAAERQGDYQFRLGNTSDADKTDPTTSQSPHPTN HHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]