Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is ybaM [C]

Identifier: 153950633

GI number: 153950633

Start: 3447862

End: 3448017

Strand: Direct

Name: ybaM [C]

Synonym: YpsIP31758_3063

Alternate gene names: 153950633

Gene position: 3447862-3448017 (Clockwise)

Preceding gene: 153947811

Following gene: 153950661

Centisome position: 73.0

GC content: 43.59

Gene sequence:

>156_bases
ATGTCAGTTGAACAAGCACCACCTGAACTACAACTGGCAGTAGATCTTATCTATCTGCTGGAATGTAACGAAATAGCACC
GGAAACGGCTCTCGCAGCATTGGCTATCGTACAACTTGATTACCAACGTAAACTTCGCCATAAAGAATCAGACTGA

Upstream 100 bases:

>100_bases
AAATACTTTCTAAATGGAAACCTAGCGAAGCTAGCACTGGTGAGTGACTGCTCTGCTCCGCTTCTTTCGTTAATTGAAAC
TTTAAATATTGGTCACATAT

Downstream 100 bases:

>100_bases
ACCTACTACTTCTGATGTGTACTGAGGCGACTCGGCACGACATCGCCTCTGCTATTCCCGCTTTTATGCTGCTGGTGCAA
TGACATGGGTTATCTCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD

Sequences:

>Translated_51_residues
MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD
>Mature_50_residues
SVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5751; Mature: 5619

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA