| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950629
Identifier: 153950629
GI number: 153950629
Start: 945147
End: 946418
Strand: Direct
Name: 153950629
Synonym: YpsIP31758_0786
Alternate gene names: NA
Gene position: 945147-946418 (Clockwise)
Preceding gene: 153947539
Following gene: 153950779
Centisome position: 20.01
GC content: 33.88
Gene sequence:
>1272_bases ATGTCGGTTCATATTGTTCAGACTAAAATAAAATCTAATGTATCATATGATGAGCTTTCTTATAGTTTCTCGCTATATAA GGATGTTTATGGAAAACGAATTTATGTTTTACCTGATACCGGTATAAAACCATTAGCAGCAGACTATAGAACACAAGAAC ATAAAACTATTGATATAACAGAAGAACAGTCCACAGTTTATATTATGGAGGTCATGCTTTACCGTAAAACGACAACCGGT GATAAACCTGTGTTACTAAGGCCTGCAACATCGATTTATTCATTTGGTAAATTTAATGGTGATAATTCCTCCCGTGAAAA TGTTTGTTATTATGAAACATTAAAATCAACTAAAGAACAGCGGGAAGGGGACGGCAATATTGCCCACCATCTTATTACCC GTAAAAAAGATAGTGTATTTGAGTCACCTCAGCATCCTAAAACTGACGAAGTAAACAATCCATTTAAAAAAAGTGATATA GAGGCGGCCTTGAATCAGAGAAAATATGGGTCATCTAATAGGGCGATAGGTGATTTTTATCCCAATCAAAAAAGAACAAT GTTATGTGGTCCTGCTGCCTTCACTTATTGTTTGATGATGGATAGATTTGATTTATATCAACAGGCAATATGGGATTTAT GGGAAACTGGTAAAACAAGAATTGGTTCATTAGTTATTACAGCTTCCGATGAAGTTAAGAAACCGGTGGATTTGTTTGGA CTTGATTATAATGGTATCGAAGAAATTAAAATACCTGCTATTGATTGGATTTTTATGGCTAGTTTAAGAGACTCCTCAAA TAACTTTATGAATTACAATAAGGTTAGTGATGCAGCATCTGCAATTACAATGTGGGGTGTGATGAGAGAATGGTTTTCCG CTGTTGGTGCAAAAAATACTTTTAGTAACATTAGCCTCTCTCATAGTAATTTAACAGATATTTCTGCTCTTAATGATTTT GTAGACACGGTTAATTATTCTACACATATCGTTGCACTGGTAAGTGCAAAGATGATGGGGGGAGCTGATACTTCATTTAA AGACCATTGGGTAGTATGGGAAAGTGGTTTAGAGACAACAAAAATTACACAAACTGATGCTACAAAATTACCAAGTACTA TTGTTTCGAAAAATACTAGTGTTAATGAAAATGTAATGCTAAAACTATTTACATGGGGTGAAGTGCGAACAAATAGACTT AATAAAGATCTAACATTAGATGATTTTTTAAATTGTTCATTTGGGGGGGTGGTATTTGCAAAAATACCATAA
Upstream 100 bases:
>100_bases AATGCATTTTTTGAGCGTTTCTAAAAACCACTTGATCTTTTTAATTTTCAACTTAAATTGATAGTGAATTAAGTGTAATT ATTGTTTTTGTGGAGGCTAG
Downstream 100 bases:
>100_bases ATTATTATGGGTAAATTTTTAAGAATATTTTCAATACTTGTGTTTGCGATTTTTTTGGGTGGTTGTGGAATGATGCTTAA TCCTCTTCTTATGAAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSVHIVQTKIKSNVSYDELSYSFSLYKDVYGKRIYVLPDTGIKPLAADYRTQEHKTIDITEEQSTVYIMEVMLYRKTTTG DKPVLLRPATSIYSFGKFNGDNSSRENVCYYETLKSTKEQREGDGNIAHHLITRKKDSVFESPQHPKTDEVNNPFKKSDI EAALNQRKYGSSNRAIGDFYPNQKRTMLCGPAAFTYCLMMDRFDLYQQAIWDLWETGKTRIGSLVITASDEVKKPVDLFG LDYNGIEEIKIPAIDWIFMASLRDSSNNFMNYNKVSDAASAITMWGVMREWFSAVGAKNTFSNISLSHSNLTDISALNDF VDTVNYSTHIVALVSAKMMGGADTSFKDHWVVWESGLETTKITQTDATKLPSTIVSKNTSVNENVMLKLFTWGEVRTNRL NKDLTLDDFLNCSFGGVVFAKIP
Sequences:
>Translated_423_residues MSVHIVQTKIKSNVSYDELSYSFSLYKDVYGKRIYVLPDTGIKPLAADYRTQEHKTIDITEEQSTVYIMEVMLYRKTTTG DKPVLLRPATSIYSFGKFNGDNSSRENVCYYETLKSTKEQREGDGNIAHHLITRKKDSVFESPQHPKTDEVNNPFKKSDI EAALNQRKYGSSNRAIGDFYPNQKRTMLCGPAAFTYCLMMDRFDLYQQAIWDLWETGKTRIGSLVITASDEVKKPVDLFG LDYNGIEEIKIPAIDWIFMASLRDSSNNFMNYNKVSDAASAITMWGVMREWFSAVGAKNTFSNISLSHSNLTDISALNDF VDTVNYSTHIVALVSAKMMGGADTSFKDHWVVWESGLETTKITQTDATKLPSTIVSKNTSVNENVMLKLFTWGEVRTNRL NKDLTLDDFLNCSFGGVVFAKIP >Mature_422_residues SVHIVQTKIKSNVSYDELSYSFSLYKDVYGKRIYVLPDTGIKPLAADYRTQEHKTIDITEEQSTVYIMEVMLYRKTTTGD KPVLLRPATSIYSFGKFNGDNSSRENVCYYETLKSTKEQREGDGNIAHHLITRKKDSVFESPQHPKTDEVNNPFKKSDIE AALNQRKYGSSNRAIGDFYPNQKRTMLCGPAAFTYCLMMDRFDLYQQAIWDLWETGKTRIGSLVITASDEVKKPVDLFGL DYNGIEEIKIPAIDWIFMASLRDSSNNFMNYNKVSDAASAITMWGVMREWFSAVGAKNTFSNISLSHSNLTDISALNDFV DTVNYSTHIVALVSAKMMGGADTSFKDHWVVWESGLETTKITQTDATKLPSTIVSKNTSVNENVMLKLFTWGEVRTNRLN KDLTLDDFLNCSFGGVVFAKIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47866; Mature: 47734
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVHIVQTKIKSNVSYDELSYSFSLYKDVYGKRIYVLPDTGIKPLAADYRTQEHKTIDIT CEEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCEEEEE EEQSTVYIMEVMLYRKTTTGDKPVLLRPATSIYSFGKFNGDNSSRENVCYYETLKSTKEQ CCCCEEEEEEEHHHHCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHH REGDGNIAHHLITRKKDSVFESPQHPKTDEVNNPFKKSDIEAALNQRKYGSSNRAIGDFY HCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCC PNQKRTMLCGPAAFTYCLMMDRFDLYQQAIWDLWETGKTRIGSLVITASDEVKKPVDLFG CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEECCHHHCCCHHHEE LDYNGIEEIKIPAIDWIFMASLRDSSNNFMNYNKVSDAASAITMWGVMREWFSAVGAKNT CCCCCCCEEECCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FSNISLSHSNLTDISALNDFVDTVNYSTHIVALVSAKMMGGADTSFKDHWVVWESGLETT CCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCE KITQTDATKLPSTIVSKNTSVNENVMLKLFTWGEVRTNRLNKDLTLDDFLNCSFGGVVFA EEECCCHHHCCHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHCCCCCCCEEEE KIP ECC >Mature Secondary Structure SVHIVQTKIKSNVSYDELSYSFSLYKDVYGKRIYVLPDTGIKPLAADYRTQEHKTIDIT EEEEEEHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCCEEEEE EEQSTVYIMEVMLYRKTTTGDKPVLLRPATSIYSFGKFNGDNSSRENVCYYETLKSTKEQ CCCCEEEEEEEHHHHCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHH REGDGNIAHHLITRKKDSVFESPQHPKTDEVNNPFKKSDIEAALNQRKYGSSNRAIGDFY HCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCC PNQKRTMLCGPAAFTYCLMMDRFDLYQQAIWDLWETGKTRIGSLVITASDEVKKPVDLFG CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEECCHHHCCCHHHEE LDYNGIEEIKIPAIDWIFMASLRDSSNNFMNYNKVSDAASAITMWGVMREWFSAVGAKNT CCCCCCCEEECCCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC FSNISLSHSNLTDISALNDFVDTVNYSTHIVALVSAKMMGGADTSFKDHWVVWESGLETT CCCEEECCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCE KITQTDATKLPSTIVSKNTSVNENVMLKLFTWGEVRTNRLNKDLTLDDFLNCSFGGVVFA EEECCCHHHCCHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHCCCCCCCEEEE KIP ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA