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The map label for this gene is yrfF [C]

Identifier: 153950480

GI number: 153950480

Start: 4457408

End: 4459555

Strand: Direct

Name: yrfF [C]

Synonym: YpsIP31758_3974

Alternate gene names: 153950480

Gene position: 4457408-4459555 (Clockwise)

Preceding gene: 153950440

Following gene: 153949914

Centisome position: 94.37

GC content: 48.56

Gene sequence:

>2148_bases
ATGAGCACAATAGTTTTAATATTGGCCTTACTGTTGACCAGTCTGATCGCCGTAGGTCTGCTGTGGTGGCTCCGATTCCG
CCGCCCTCACCCCATAACAGCAGCGTTGCCGTTTGTTAAACCGACACACCGAAAACTCACGCCAGAAGAGCGAGTGAGTA
TCGAAAATTATCTGCGTAATCAGCAAAATAAGCATGGTTTTAACACGCAACCGGCTTTTGATTCCCACGCACTGGCAGCC
AGTACCTCATCCACCCCAATGTTGGTGCTCACACCGCAAAGTGATAACGTCTATTCCGTTACCCGCGCCATTACTCGCTA
TGGTGTCGCCAGCGATGAGCCAAATAAATGGCGCTATTATCTCGATTCAATAGAAGTTCATCTGCCCTCGGCCTGGGAAC
AATATATTACTCAGGATAATGATGTTGAGCTTATCCAAACCCAGACAATCCCGCTGGTGATCTCCCTTAATGGGCATACG
CTTAACAATCATCAGTCTGAGAATACCTATCAGCCCATTTTACCTTCAGTATCGAAAAATGCGTCTATTCGCAAAGAAGA
TAGCGAACATATTGAGCTGCTTAATATCCGTAAGGAAACCCCGGAAGAATATGCTCTGCATGGCCCCAATGGTTTAAAAG
AAGCCTGCGCCATTTGCATAGCTCTATTGTTGCTGTTTTTCGCATTATCCGGGCCGACGGTGACACTACCCTGGCTGGTT
ATCGTGGCAGTGTCATTAACCTGTTGGGCGTGTTGGAACCTCTTCCGCCCCTTGTCAGAAAAAGATTTGCGGGAAGTGCA
CTGCTTAAATGGTACCCCCAAACGCTGGGGCCTGTTTGGCGAGTCAAATCAGGGGCAGATAAACAATATCTCACTCGGGA
TCGTTGATCTCATTTATCCGGCGCATTGGGGACCTTATTTTGTACATGATTTAGGCAAAAAAACCCATATTGATATCTAC
CTTAATCGCCAGGTTGTACGTCAGGGGGCTTTTTTATCCCTCCATGATGAAATGAAAATGTTCCCGTTACAGCGCTGGGG
GAAAAACCTAACCTTGATCGTCGGCTCACTGTTGGTTCTGGTGTTATTACTGATTTACGTACCGCTCGGTCTCCCCCTAA
AGTTGAGCGTTGCCTGGTTGCAAGGGGCTCAAAGCCAACAGGTGACCAGCGTCGCAGCACTGGACAAAATGCCACTACGC
ATCGGCGATATGCTGAAGGCTCAGGGTAATGGCATGTGCTATGTCCCCCCCAACATTCAAAACACACGCGGTTTCGTTTT
CACCCCCTTTGATTGCTCCGGTATTTATTGGAATACCGCCTCCCCCTTGCCACAACCTGAATCTGAAACCATAGAAAAAG
CTGCGGCACTGGTAGAAACAATCAATAAACAACTGCACCCGCAGGGCTCTGATGCCAGCGTCAACCCGAAACTGGCTACC
GCCATTGAGAAATCGGGCATGATTTTATTGGACGATTTTTCTGACATTGTGCTGAAAACACAGGCGTTATGTAGCGAAAA
TACCGATTGTATTCGCCTGAAGAATGCACTGGTTAATCTGGGGAATGCCAAAAACTGGTCAGCCTTGGTCAAACGGGCGC
AATCCGGGAATTTGGAAGGGATGAATGTTCTGCTACGCCCGATCAGTGCCGATGTACTGGAAAATTTGATTAATACCGCT
GCGTCATCATTCGTTTATCGTGAAACGCATTTAGCAACAGAAGCGTTGAATAGCCCACCTCCGGGCGGTTTTTTGATCAC
CAGCGATGAGGGCAAGCAGTTAGTGAACCACCCTGCGCCAACGCTGCCCCTGTTTGACTACAGCGCACTGGAACAGTGGC
GGGAATTGCAACGGCTCTCGGCGTTGCTACTTGATACCCCATTTAAAGCGGAAGGGATTATTACCAATATCACGACTGAT
GCGAATGGCACACGGCATATTGCGCTGCATAGTGAGCCGGACATTGTCACTCTGGGTCGCTATCTGGCGACCAGCCTGCT
ATTGCTGGTGCTGATTTTTTGCCTGGTCGTCAATATGGTCTTGTTGATTCAACGTGCCATGAAAAATCGTCGCCGGATGG
ATAACATTCAACGTTATTATGACGATTGCTTTAATCAAACGCTCACACCGCCCCCCTTCTTGCGCTAG

Upstream 100 bases:

>100_bases
AGGCACTAAATCGTTGAGTTATTAGGCCATATGCCTCCGCACTTTTTTATGTATTTTTCATAGCGTTGACGTAAATTTAA
AGCGCTCTGATGGGGATGGG

Downstream 100 bases:

>100_bases
CTCACCCATCTCCGGTTGATCATCGCTCATGCCAGCAGATGCACGGTGTAACATGGATATGCTAGGCTAGCTTTATCTAC
TCGCTTATAGCAGAAAATAT

Product: intracellular growth attenuator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 715; Mature: 714

Protein sequence:

>715_residues
MSTIVLILALLLTSLIAVGLLWWLRFRRPHPITAALPFVKPTHRKLTPEERVSIENYLRNQQNKHGFNTQPAFDSHALAA
STSSTPMLVLTPQSDNVYSVTRAITRYGVASDEPNKWRYYLDSIEVHLPSAWEQYITQDNDVELIQTQTIPLVISLNGHT
LNNHQSENTYQPILPSVSKNASIRKEDSEHIELLNIRKETPEEYALHGPNGLKEACAICIALLLLFFALSGPTVTLPWLV
IVAVSLTCWACWNLFRPLSEKDLREVHCLNGTPKRWGLFGESNQGQINNISLGIVDLIYPAHWGPYFVHDLGKKTHIDIY
LNRQVVRQGAFLSLHDEMKMFPLQRWGKNLTLIVGSLLVLVLLLIYVPLGLPLKLSVAWLQGAQSQQVTSVAALDKMPLR
IGDMLKAQGNGMCYVPPNIQNTRGFVFTPFDCSGIYWNTASPLPQPESETIEKAAALVETINKQLHPQGSDASVNPKLAT
AIEKSGMILLDDFSDIVLKTQALCSENTDCIRLKNALVNLGNAKNWSALVKRAQSGNLEGMNVLLRPISADVLENLINTA
ASSFVYRETHLATEALNSPPPGGFLITSDEGKQLVNHPAPTLPLFDYSALEQWRELQRLSALLLDTPFKAEGIITNITTD
ANGTRHIALHSEPDIVTLGRYLATSLLLLVLIFCLVVNMVLLIQRAMKNRRRMDNIQRYYDDCFNQTLTPPPFLR

Sequences:

>Translated_715_residues
MSTIVLILALLLTSLIAVGLLWWLRFRRPHPITAALPFVKPTHRKLTPEERVSIENYLRNQQNKHGFNTQPAFDSHALAA
STSSTPMLVLTPQSDNVYSVTRAITRYGVASDEPNKWRYYLDSIEVHLPSAWEQYITQDNDVELIQTQTIPLVISLNGHT
LNNHQSENTYQPILPSVSKNASIRKEDSEHIELLNIRKETPEEYALHGPNGLKEACAICIALLLLFFALSGPTVTLPWLV
IVAVSLTCWACWNLFRPLSEKDLREVHCLNGTPKRWGLFGESNQGQINNISLGIVDLIYPAHWGPYFVHDLGKKTHIDIY
LNRQVVRQGAFLSLHDEMKMFPLQRWGKNLTLIVGSLLVLVLLLIYVPLGLPLKLSVAWLQGAQSQQVTSVAALDKMPLR
IGDMLKAQGNGMCYVPPNIQNTRGFVFTPFDCSGIYWNTASPLPQPESETIEKAAALVETINKQLHPQGSDASVNPKLAT
AIEKSGMILLDDFSDIVLKTQALCSENTDCIRLKNALVNLGNAKNWSALVKRAQSGNLEGMNVLLRPISADVLENLINTA
ASSFVYRETHLATEALNSPPPGGFLITSDEGKQLVNHPAPTLPLFDYSALEQWRELQRLSALLLDTPFKAEGIITNITTD
ANGTRHIALHSEPDIVTLGRYLATSLLLLVLIFCLVVNMVLLIQRAMKNRRRMDNIQRYYDDCFNQTLTPPPFLR
>Mature_714_residues
STIVLILALLLTSLIAVGLLWWLRFRRPHPITAALPFVKPTHRKLTPEERVSIENYLRNQQNKHGFNTQPAFDSHALAAS
TSSTPMLVLTPQSDNVYSVTRAITRYGVASDEPNKWRYYLDSIEVHLPSAWEQYITQDNDVELIQTQTIPLVISLNGHTL
NNHQSENTYQPILPSVSKNASIRKEDSEHIELLNIRKETPEEYALHGPNGLKEACAICIALLLLFFALSGPTVTLPWLVI
VAVSLTCWACWNLFRPLSEKDLREVHCLNGTPKRWGLFGESNQGQINNISLGIVDLIYPAHWGPYFVHDLGKKTHIDIYL
NRQVVRQGAFLSLHDEMKMFPLQRWGKNLTLIVGSLLVLVLLLIYVPLGLPLKLSVAWLQGAQSQQVTSVAALDKMPLRI
GDMLKAQGNGMCYVPPNIQNTRGFVFTPFDCSGIYWNTASPLPQPESETIEKAAALVETINKQLHPQGSDASVNPKLATA
IEKSGMILLDDFSDIVLKTQALCSENTDCIRLKNALVNLGNAKNWSALVKRAQSGNLEGMNVLLRPISADVLENLINTAA
SSFVYRETHLATEALNSPPPGGFLITSDEGKQLVNHPAPTLPLFDYSALEQWRELQRLSALLLDTPFKAEGIITNITTDA
NGTRHIALHSEPDIVTLGRYLATSLLLLVLIFCLVVNMVLLIQRAMKNRRRMDNIQRYYDDCFNQTLTPPPFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the igaA family [H]

Homologues:

Organism=Escherichia coli, GI1789801, Length=719, Percent_Identity=53.4075104311544, Blast_Score=706, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010771
- ProDom:   PD147088 [H]

Pfam domain/function: PF07095 IgaA [H]

EC number: NA

Molecular weight: Translated: 79941; Mature: 79810

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIVLILALLLTSLIAVGLLWWLRFRRPHPITAALPFVKPTHRKLTPEERVSIENYLRN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHC
QQNKHGFNTQPAFDSHALAASTSSTPMLVLTPQSDNVYSVTRAITRYGVASDEPNKWRYY
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEE
LDSIEVHLPSAWEQYITQDNDVELIQTQTIPLVISLNGHTLNNHQSENTYQPILPSVSKN
EEEEEEECCHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ASIRKEDSEHIELLNIRKETPEEYALHGPNGLKEACAICIALLLLFFALSGPTVTLPWLV
CCCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IVAVSLTCWACWNLFRPLSEKDLREVHCLNGTPKRWGLFGESNQGQINNISLGIVDLIYP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEHHHHHHC
AHWGPYFVHDLGKKTHIDIYLNRQVVRQGAFLSLHDEMKMFPLQRWGKNLTLIVGSLLVL
CCCCCHHHHHCCCCEEEEEEECHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHH
VLLLIYVPLGLPLKLSVAWLQGAQSQQVTSVAALDKMPLRIGDMLKAQGNGMCYVPPNIQ
HHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCC
NTRGFVFTPFDCSGIYWNTASPLPQPESETIEKAAALVETINKQLHPQGSDASVNPKLAT
CCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AIEKSGMILLDDFSDIVLKTQALCSENTDCIRLKNALVNLGNAKNWSALVKRAQSGNLEG
HHHHCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
MNVLLRPISADVLENLINTAASSFVYRETHLATEALNSPPPGGFLITSDEGKQLVNHPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCC
TLPLFDYSALEQWRELQRLSALLLDTPFKAEGIITNITTDANGTRHIALHSEPDIVTLGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEHHHH
YLATSLLLLVLIFCLVVNMVLLIQRAMKNRRRMDNIQRYYDDCFNQTLTPPPFLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STIVLILALLLTSLIAVGLLWWLRFRRPHPITAALPFVKPTHRKLTPEERVSIENYLRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHC
QQNKHGFNTQPAFDSHALAASTSSTPMLVLTPQSDNVYSVTRAITRYGVASDEPNKWRYY
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEE
LDSIEVHLPSAWEQYITQDNDVELIQTQTIPLVISLNGHTLNNHQSENTYQPILPSVSKN
EEEEEEECCHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ASIRKEDSEHIELLNIRKETPEEYALHGPNGLKEACAICIALLLLFFALSGPTVTLPWLV
CCCCCCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IVAVSLTCWACWNLFRPLSEKDLREVHCLNGTPKRWGLFGESNQGQINNISLGIVDLIYP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEHHHHHHC
AHWGPYFVHDLGKKTHIDIYLNRQVVRQGAFLSLHDEMKMFPLQRWGKNLTLIVGSLLVL
CCCCCHHHHHCCCCEEEEEEECHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHH
VLLLIYVPLGLPLKLSVAWLQGAQSQQVTSVAALDKMPLRIGDMLKAQGNGMCYVPPNIQ
HHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCC
NTRGFVFTPFDCSGIYWNTASPLPQPESETIEKAAALVETINKQLHPQGSDASVNPKLAT
CCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
AIEKSGMILLDDFSDIVLKTQALCSENTDCIRLKNALVNLGNAKNWSALVKRAQSGNLEG
HHHHCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
MNVLLRPISADVLENLINTAASSFVYRETHLATEALNSPPPGGFLITSDEGKQLVNHPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCC
TLPLFDYSALEQWRELQRLSALLLDTPFKAEGIITNITTDANGTRHIALHSEPDIVTLGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEHHHH
YLATSLLLLVLIFCLVVNMVLLIQRAMKNRRRMDNIQRYYDDCFNQTLTPPPFLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]