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The map label for this gene is ybjZ [C]

Identifier: 153950435

GI number: 153950435

Start: 2456723

End: 2457853

Strand: Reverse

Name: ybjZ [C]

Synonym: YpsIP31758_2137

Alternate gene names: 153950435

Gene position: 2457853-2456723 (Counterclockwise)

Preceding gene: 153950810

Following gene: 153950413

Centisome position: 52.04

GC content: 49.25

Gene sequence:

>1131_bases
ATGAAAGGCAATGATAGTATGTTTTGGCGGTTGGTGCTGCGTGCGCTTCGTTTACGTATGCAACGTGTCAGTGTCGTCTT
TGCCGCACTGACCGTTGGCGCGGCGATTGTTACCGCAATGTCGGCAGTCTATTTCGATATTAATGCCAAAATGAGTCAGG
AATTACGGACATTCGGCGCTAATTTTTATATTGGCCCAGGTCAGGGTAGTACCTTTGAACAGCAGACTTTTCAACCCATT
ATTGATTCCGCGCCGAAAGGTCTGATTAATGCTTCCAGTCCCTATATTTATGGTATGGCTCGTACCGAGCTGGAAAAAGT
GGTTTTGATGGGCGTCTGGTTTGAATCCTTGCAACAGTTAGTCCCCTATTGGCAGGTAACCGGCAATTGGATCGGGGTCA
GTTTTGATGATCGCAATGCGATGATCGGTGCCAAACTGGCGGAACGTTTGCATGTCAATGTAGGCGATACCCTAACATTG
GTGGGCGAAGGGACCCGCCAACGCTTACAAATAAAAGGTATTGTTGAAGCAGGTGACGCGACCGATAACATGTTGATCGT
CAATTTGGAGCTGGCGCAAAAGTGGCTCAATCAACCTGAGCGGATCAGTAATGCATTACTGAGTGTCAGCAATGATGTTG
GGCAGGTAGAAACCTTTGCCAGTCATCTACGCGAACAATATCCAGATCTGGAAATTCGCCCAATTCGCAAAGTATCTGCC
TCTGAGGGGCAGGTTCTTGACAAGATAAAAGGGTTGATGGGGCTGGTCTCGGTGGTCATCCTCATTCTCTCCTCTCTGTG
TGTCAATACCACGTTGATGGCGATAGTGGGTGAACGTTCGAAAGAGTTTGCGTTGCAAAAAGCACTGGGTGCCAGTGGGC
GTGACATTATCCGCCAAATGTTGACTGAAACGATGATTATTTCGCTAGCCGCCGCGGTCTGTGGTGCTGTGTTAGGGTAT
TTGCTGGCTCAGGTCTTGGGGCAGGCGGTGTTCAGTGCGGCAATTACATTGCGTGCACCGGTATTGCCGCTAACCTTGGT
GCTTTCGTTGTTTGTTGCCGCTGTGGCGGCGATTGTTCCCACCCGACGGGCTATTCATATTGAACCCGCTAAAGTTCTTA
AAGGAGAGTAG

Upstream 100 bases:

>100_bases
TGGTTCCCCGCTCGTCGTATTACTCGCCTCTACCCGGTGGAGGTGCTATATGGCCGGTAATCATCATAAAGGCAATGATG
GCATGAAAGGCAATGATGGT

Downstream 100 bases:

>100_bases
CGAATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGGCTGATGCCGTTATTGAAACCCGACATTTGTATAAGCG
CTTTGGTCAAGTTACGGCAC

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Permease Protein; Efflux ABC Transporter Permease; Lipoprotein ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; Integral Membrane Protein; Permease Domain-Containing Protein; Efflux ABC Transporter Permease Protein; ABC Transporter; Outer Membrane Protein Putative Permease; Integral Membrane Protein Putative Permease; Integral Membrane Protein-Permease Component; Hydrogenase 4 Membrane Subunit; ABC-Type Transport System Permease Component

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPI
IDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTL
VGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDLEIRPIRKVSA
SEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGY
LLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Sequences:

>Translated_376_residues
MKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPI
IDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTL
VGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDLEIRPIRKVSA
SEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGY
LLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
>Mature_376_residues
MKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPI
IDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTL
VGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDLEIRPIRKVSA
SEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGY
LLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40928; Mature: 40928

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCC
NFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQL
CEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDA
CCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHEEEEEEEECCCC
TDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDLEIRPIRKVSA
CCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCC
SEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
LTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
TRRAIHIEPAKVLKGE
CCCEEEECHHHHCCCC
>Mature Secondary Structure
MKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKMSQELRTFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCC
NFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQL
CEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
VPYWQVTGNWIGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDA
CCHHEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHEEEEEEEECCCC
TDNMLIVNLELAQKWLNQPERISNALLSVSNDVGQVETFASHLREQYPDLEIRPIRKVSA
CCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCC
SEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGASGRDIIRQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
LTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
TRRAIHIEPAKVLKGE
CCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA