| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950387
Identifier: 153950387
GI number: 153950387
Start: 747181
End: 747447
Strand: Reverse
Name: 153950387
Synonym: YpsIP31758_0637
Alternate gene names: NA
Gene position: 747447-747181 (Counterclockwise)
Preceding gene: 153950687
Following gene: 153950045
Centisome position: 15.82
GC content: 52.43
Gene sequence:
>267_bases ATGGAAATTAACACGCATCGCCGGCAACCGTATGTCGCCCAACCGGTGAGTACTGATACGGTATCAGCCGTCAAAGCGAT AGAGCCGATTAAAGCCGTCACTAACAACCCCCATTACGCAACCTCTGACCTGCATACCCAACTGGACGCAATGCCAGAAG TAGACAGTGAAAAGGTTGATGCCGCTAAGGCCGCAATTCTCGCGGGAAGAATTACTCTCGACAGTGCGGCTGTCGCCAAA GCTATGCTCAACTTCCACGGGAGGTAA
Upstream 100 bases:
>100_bases GAGTGTGGGCGTTATTCGCTGCAACTCGAATGAGTTAGGGTATACGCATTTAGCGATTTAATAAGTTCACGGTAATTTAA CTGACAAAAGGTGATTTTAG
Downstream 100 bases:
>100_bases TCTGTTATGGAGCCGGCACAACGTGTTAAACAACTGCTGATAGACATTCAGGAAGATCGTAAACGTTACATCGCGCTGGA AAAACTGTTAATCAAGCAAC
Product: anti-sigma-28 factor, FlgM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MEINTHRRQPYVAQPVSTDTVSAVKAIEPIKAVTNNPHYATSDLHTQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAK AMLNFHGR
Sequences:
>Translated_88_residues MEINTHRRQPYVAQPVSTDTVSAVKAIEPIKAVTNNPHYATSDLHTQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAK AMLNFHGR >Mature_88_residues MEINTHRRQPYVAQPVSTDTVSAVKAIEPIKAVTNNPHYATSDLHTQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAK AMLNFHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9481; Mature: 9481
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINTHRRQPYVAQPVSTDTVSAVKAIEPIKAVTNNPHYATSDLHTQLDAMPEVDSEKVD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHH AAKAAILAGRITLDSAAVAKAMLNFHGR HHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MEINTHRRQPYVAQPVSTDTVSAVKAIEPIKAVTNNPHYATSDLHTQLDAMPEVDSEKVD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHH AAKAAILAGRITLDSAAVAKAMLNFHGR HHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA