| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is bcsZ [H]
Identifier: 153950370
GI number: 153950370
Start: 4586251
End: 4587366
Strand: Reverse
Name: bcsZ [H]
Synonym: YpsIP31758_4070
Alternate gene names: 153950370
Gene position: 4587366-4586251 (Counterclockwise)
Preceding gene: 153949844
Following gene: 229294895
Centisome position: 97.12
GC content: 50.45
Gene sequence:
>1116_bases ATGGTCGTCATGTTTAAACACTTAGCCAGCATGTTCCTGTTGCTGGCCAGTTTTAGTCTCGCAGCCGCCAGTAACTGGCC CGCGTGGCAACAGTTCAAACAAGATTACATCAGTGAAGGGGGGCGGATCATTGACCCCGGTAGCCCCTCGAAAATAACCA CCTCGGAAGGCCAGAGTTATGGGCTTTTTTTTGCATTGGTTGCGGATGATCAGCCGATGTTTGAGCGTTTATTGGCTTGG ACAGAAAACAATCTGGCAGCCGGTGATCTCACTTCCCGCCTTCCCGCTTGGTTATGGGGGCAAAACTCACAAAATAACTG GGATATTCTGGACCCTAATTCGGCCTCCGATGCGGATATCTTGATTGCCTACAACTTGCTGGAGGCTGGCAGGTTATGGG GTAACCGCCGTTACCTGATTATGGGTACCTTATTACTGCAACGTATTGCGCAAGAAGAAGTCATGGATATTCCCGGCCTT GGCCAGATGCTATTACCGGGAAAAATTGGTTTTAACGATGAGGATACCTGGCGTCTCAACCCAAGTTATTTACCGCCACA ACTACTGGCACGATTTTCCTCCATAGACGGGCCTTGGGAAGCGATGGTAGAAGTGAATCAGCGTATGTGGCTGGAAACCG CACCAAACGGTTTTTCGCCGGACTGGGTGGTCTGGCAGAAAGGTAAAGGCTGGCAGCCCGATACCATAAAACCGGATGTC GGCAGTAACGATGCCATTCTGGTTTATCTGTGGGCGGGGATGCTGGCAATGGACAGCCCACAAAAAGCTGAATTGATTGC GCGTTTTCAGCCAATGGCGGTAATCACTCAGCAGCAAGGCCTGCCACCGTTTACGACCAACAGCGACAATGGTAAAACTA ACGGGGATGGGTCAGTGGGTTTTTCTGCGGCATTATTGCCCTTTTTAGCCAGCAGCCCAGAGCCATTTAATCAGCAAACA CTGAATCTCCAACAGCGACGGGTACAAAATTCACCGCCTGGCGCTGATGATTATTACAGTGCTATTCTGACCCTGTTTGG TCAGGGGTGGTTACAGCATCGTTATCATTTTACCCATCAGGGAGAGCTACAGCCCTCATGGCACCGTCAACGTTAA
Upstream 100 bases:
>100_bases ACATGGTTTGATCAACATGGGTAAGTCGCGATTACCGATGGCACTTGTGATGTCTGATAACCTCTCGCCGGTTATCACCT GATGAGAGGGAGTTATTCTG
Downstream 100 bases:
>100_bases GATTTCAGGGTAGGGCGGATCTGGCCTAATGATAGGGAAATGCGCTTAAGGGATCACAACTTACTCGATGGGGACTAAAA AGGGGCGTCTAAACACCAAG
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MVVMFKHLASMFLLLASFSLAAASNWPAWQQFKQDYISEGGRIIDPGSPSKITTSEGQSYGLFFALVADDQPMFERLLAW TENNLAAGDLTSRLPAWLWGQNSQNNWDILDPNSASDADILIAYNLLEAGRLWGNRRYLIMGTLLLQRIAQEEVMDIPGL GQMLLPGKIGFNDEDTWRLNPSYLPPQLLARFSSIDGPWEAMVEVNQRMWLETAPNGFSPDWVVWQKGKGWQPDTIKPDV GSNDAILVYLWAGMLAMDSPQKAELIARFQPMAVITQQQGLPPFTTNSDNGKTNGDGSVGFSAALLPFLASSPEPFNQQT LNLQQRRVQNSPPGADDYYSAILTLFGQGWLQHRYHFTHQGELQPSWHRQR
Sequences:
>Translated_371_residues MVVMFKHLASMFLLLASFSLAAASNWPAWQQFKQDYISEGGRIIDPGSPSKITTSEGQSYGLFFALVADDQPMFERLLAW TENNLAAGDLTSRLPAWLWGQNSQNNWDILDPNSASDADILIAYNLLEAGRLWGNRRYLIMGTLLLQRIAQEEVMDIPGL GQMLLPGKIGFNDEDTWRLNPSYLPPQLLARFSSIDGPWEAMVEVNQRMWLETAPNGFSPDWVVWQKGKGWQPDTIKPDV GSNDAILVYLWAGMLAMDSPQKAELIARFQPMAVITQQQGLPPFTTNSDNGKTNGDGSVGFSAALLPFLASSPEPFNQQT LNLQQRRVQNSPPGADDYYSAILTLFGQGWLQHRYHFTHQGELQPSWHRQR >Mature_371_residues MVVMFKHLASMFLLLASFSLAAASNWPAWQQFKQDYISEGGRIIDPGSPSKITTSEGQSYGLFFALVADDQPMFERLLAW TENNLAAGDLTSRLPAWLWGQNSQNNWDILDPNSASDADILIAYNLLEAGRLWGNRRYLIMGTLLLQRIAQEEVMDIPGL GQMLLPGKIGFNDEDTWRLNPSYLPPQLLARFSSIDGPWEAMVEVNQRMWLETAPNGFSPDWVVWQKGKGWQPDTIKPDV GSNDAILVYLWAGMLAMDSPQKAELIARFQPMAVITQQQGLPPFTTNSDNGKTNGDGSVGFSAALLPFLASSPEPFNQQT LNLQQRRVQNSPPGADDYYSAILTLFGQGWLQHRYHFTHQGELQPSWHRQR
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=370, Percent_Identity=53.7837837837838, Blast_Score=418, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 41661; Mature: 41661
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMFKHLASMFLLLASFSLAAASNWPAWQQFKQDYISEGGRIIDPGSPSKITTSEGQSY CEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCCCCCC GLFFALVADDQPMFERLLAWTENNLAAGDLTSRLPAWLWGQNSQNNWDILDPNSASDADI EEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCEECCCCCCCCEE LIAYNLLEAGRLWGNRRYLIMGTLLLQRIAQEEVMDIPGLGQMLLPGKIGFNDEDTWRLN EEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEC PSYLPPQLLARFSSIDGPWEAMVEVNQRMWLETAPNGFSPDWVVWQKGKGWQPDTIKPDV CCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCC GSNDAILVYLWAGMLAMDSPQKAELIARFQPMAVITQQQGLPPFTTNSDNGKTNGDGSVG CCCCEEEEEEEHHHHHCCCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC FSAALLPFLASSPEPFNQQTLNLQQRRVQNSPPGADDYYSAILTLFGQGWLQHRYHFTHQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEECCCC GELQPSWHRQR CCCCCCCCCCC >Mature Secondary Structure MVVMFKHLASMFLLLASFSLAAASNWPAWQQFKQDYISEGGRIIDPGSPSKITTSEGQSY CEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCCCCCC GLFFALVADDQPMFERLLAWTENNLAAGDLTSRLPAWLWGQNSQNNWDILDPNSASDADI EEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCEECCCCCCCCEE LIAYNLLEAGRLWGNRRYLIMGTLLLQRIAQEEVMDIPGLGQMLLPGKIGFNDEDTWRLN EEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEEEC PSYLPPQLLARFSSIDGPWEAMVEVNQRMWLETAPNGFSPDWVVWQKGKGWQPDTIKPDV CCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCC GSNDAILVYLWAGMLAMDSPQKAELIARFQPMAVITQQQGLPPFTTNSDNGKTNGDGSVG CCCCEEEEEEEHHHHHCCCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC FSAALLPFLASSPEPFNQQTLNLQQRRVQNSPPGADDYYSAILTLFGQGWLQHRYHFTHQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEECCCC GELQPSWHRQR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]