| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950340
Identifier: 153950340
GI number: 153950340
Start: 1883582
End: 1884481
Strand: Reverse
Name: 153950340
Synonym: YpsIP31758_1624
Alternate gene names: NA
Gene position: 1884481-1883582 (Counterclockwise)
Preceding gene: 153949817
Following gene: 153946817
Centisome position: 39.9
GC content: 47.56
Gene sequence:
>900_bases ATGTGTATTGATAAACCAGAGTCAGATCCGCTGATCCTTACACTTCCTAACACGCGCTGGGACCAGAATGCAGAGGATAA TACCGGTGCCATTGAGGCACTTGAGCAAGGTAAAGTCCTGTTCTTACCTCACCTGACTTTTGAACTGAGTGAGCAGGAAA AACAGTTACTGGACCCTACCCTGGTTGATGTTAAACGCAAGAATATCAGTTTCAAACCGTTAGAAGGTGTATTAACTGGC GTGACTGATGCAAGCAAAATCGCATTAACCCGCCAGTTATTGGATCGTTATTATCAAAGTTGCCTCAGTTTGGTACAGCA ACTCCTCCCGGTCTATACGCATGCGCTACACAGCCCGACCAATAGTTTGAGATTACACCCTGTGGCCGCCTGGCGCGACA GTACGTCATGGCGTAAAGATGATAGCCGCTTACATGTAGATGCTTTCCCGTCACGCCCAAACTACGGTGAGCGTATCATC CGCATATTCACCAATATTAACCCGCATGGTGAAGCGCGTTCCTGGCGTGTCGGTGAAGATTTTACACAACTTGCCAGCCG CTATTTGCCACAACTGGATAGCTATTCATCGCTCAGCAGTTGGTTGCAACATAAAATCGGTATCACCAAGCGCCCCCGTA GCCATTACGACCATCTGATGCTCCAACTGCATGACAAAATGAAGGCCGATCTCGCTTATCAAAAAGATGGCTTACAACAG GCCATTGAGTTCCCACCAGGCAGCAGTTGGATATGCTTTTCGGATCAAACACCTCATGCGGCGATGGGCGGACAATTTAT GTTGGAACAAACGTTCCTACTACCTGTTGAAGGAATGAAATCCTCCCAGCGCTCACCACTGAAAATACTGGAAGCGTTGA CACAAAAAACGCTGATATAA
Upstream 100 bases:
>100_bases AAAATATAAAAAGCGGAAGTGAGCATCTCAAGCCTCACGTTACCTATAATAAAGGGTTATTATTGACAGAATTATATTGA TATTTAGGAGCAGATCTTTG
Downstream 100 bases:
>100_bases GTGGCCACATAGCGTCTGACTCCCCCATTAACCCTATGGGGGAGTTAATAGACTAAGGCTCACGCGCCTGCCTGATATAC ACCGCCAACTAATCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI
Sequences:
>Translated_299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI >Mature_299_residues MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFKPLEGVLTG VTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERII RIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34129; Mature: 34129
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCHH LVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPT HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGED CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH FTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI HHCCCCCCCEEEECCCCCCHHCCCCEEEHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPT CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHHHHHHCCHH LVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPT HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEARSWRVGED CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH FTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLAYQKDGLQQ HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEFPPGSSWICFSDQTPHAAMGGQFMLEQTFLLPVEGMKSSQRSPLKILEALTQKTLI HHCCCCCCCEEEECCCCCCHHCCCCEEEHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA