| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950297
Identifier: 153950297
GI number: 153950297
Start: 865548
End: 866621
Strand: Direct
Name: 153950297
Synonym: YpsIP31758_0708
Alternate gene names: NA
Gene position: 865548-866621 (Clockwise)
Preceding gene: 153949690
Following gene: 153946940
Centisome position: 18.33
GC content: 46.55
Gene sequence:
>1074_bases ATGAGCAAATGGTCTGAAGAAAAGTCATGGGAATGGCATAAACAGCAGGGGTGGTTGCGTGGTTTTAACTATTTACCGCG TACCGCCGTCAACTGGACTGAAATGTGGCAACAGGATACGTTCGATCCGGCTTGTATGACTCAAGAGCTGCAATGGGCTG CTGAGGCAGGGTACAACACACTGCGGACCAATTTGCCCTTTGTTGTCTGGCAGCATGATCCTGATGGATTAATGACTAGA GTTGAGCATTTTCTCGATATTTGCCAACGTATTGGCATCAAAGTGATGTTAACGCTAATGGATGATTGTGGCTTTTCTGG TGACCATCCTTTTATCGGGCAACAAAAACAACCTATTCCCGGTTTGCATAATAGTCAGGCTGCCGCCAGCCCTGGTCGCA ATGTGGTCATGCAGCCTTATTTATGGGGACAGGTTGAACGGTATCTCAAAGAGATTATTGGTCATTTCGCTCACGATGAA CGGATCGTGATATGGGATCTCTACAACGAGCCAACCAACCGTATGATTTTCACCTTAGCGGGTGAAGACGCGTTTGATCC GGCGCTGGAAGAATATAGCCACCAGTTAATGGAAAAAGCGTTTATGTGGGCACGGGAGGTCAACCCGACACAGCCACTCA CGGTGGGCGCGTGGCATATTGCTAATATTCTGGATCTCGGTGCACCTATTTATCAGCATCCGACGGATATACGTGCCTTG GAATTATCGGATATCATCTCCTTCCATGCCTATGTACCATTAGATTTAATGAACAAAGCGATTGGCCTTTTGAAAGAATA TAAGCGCCCAATGCTGTGTACCGAATGGTTGGCCCGTCATGCCGAATCGAAAATGCATGAACAGTTACCTTTGTTTAACG CTGAAGGTATTGGTTGCTACCAATGGGGGTTAGTCAAAGGCGCGACTCAAACTCATATTCCATGGCCTGAAATTAAACGT ACCGATAATGACTATGCGTCCCGCTGGTTCCATGATGTTTTTAATGAGGAGGGTACCGCTTATGACCCCTCTGAAATGGA ACTGCTAAAGGCGTTAGCCCTGAAAAATACATAA
Upstream 100 bases:
>100_bases TTTTGTGATGAGAGTCACTTTTGATGCGATGACTGTTTGATATTAGTTTATTAGCTAATATATTAGCCAGGATGTGGCTA CTTATTAGATGAGAATAATT
Downstream 100 bases:
>100_bases ATATAGCCGGCTCTGCCATAGCAACCTCAGTGACATATCGGGCTGTGGCGGGCATTAAAAATTTATCTGTACCTTACATA ATATATACCCAAGTGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTR VEHFLDICQRIGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDE RIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKR TDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT
Sequences:
>Translated_357_residues MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTR VEHFLDICQRIGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDE RIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKR TDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT >Mature_356_residues SKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRV EHFLDICQRIGIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDER IVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRALE LSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRT DNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41446; Mature: 41314
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNT CCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHH LRTNLPFVVWQHDPDGLMTRVEHFLDICQRIGIKVMLTLMDDCGFSGDHPFIGQQKQPIP HHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLA CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC GEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCHHCCCCCCHHH ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE QWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT HHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SKWSEEKSWEWHKQQGWLRGFNYLPRTAVNWTEMWQQDTFDPACMTQELQWAAEAGYNT CCCCCCCCCHHHHHCCHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHH LRTNLPFVVWQHDPDGLMTRVEHFLDICQRIGIKVMLTLMDDCGFSGDHPFIGQQKQPIP HHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLA CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEC GEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCHHCCCCCCHHH ELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMHEQLPLFNAEGIGCY HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE QWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYDPSEMELLKALALKNT HHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA