| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950258
Identifier: 153950258
GI number: 153950258
Start: 424140
End: 424259
Strand: Direct
Name: 153950258
Synonym: YpsIP31758_0363
Alternate gene names: NA
Gene position: 424140-424259 (Clockwise)
Preceding gene: 153949745
Following gene: 153950677
Centisome position: 8.98
GC content: 22.5
Gene sequence:
>120_bases ATGGCAAGCATAAAATCATGGTTGTATCTATTTTGTTTTAAAATGGTTAATTTTCTGGTTGTTTGTCCTATTTATTTGAT CGTATTTATTCTTAAATCAATTTTATTAACCAATTTTTAA
Upstream 100 bases:
>100_bases GTGAACAGAGGTGGATCGCCATTCGAAAATGAGAGGTATATCTCAATTTCGCCTCATGATTATATCGATGACTGTCTTTT GAGTGCGATTAACGTGCTAC
Downstream 100 bases:
>100_bases CCAAATAAATCACTTAAATTAACTTTAATGGGCTTGCATCACATTTCAATCGGGTCCGCCGAGCAGCCTCTTGTGTTTTT TTGTTAACCTTTGGTCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MASIKSWLYLFCFKMVNFLVVCPIYLIVFILKSILLTNF
Sequences:
>Translated_39_residues MASIKSWLYLFCFKMVNFLVVCPIYLIVFILKSILLTNF >Mature_38_residues ASIKSWLYLFCFKMVNFLVVCPIYLIVFILKSILLTNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4633; Mature: 4502
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIKSWLYLFCFKMVNFLVVCPIYLIVFILKSILLTNF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASIKSWLYLFCFKMVNFLVVCPIYLIVFILKSILLTNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA